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  5. Solyc03g113140

Solyc03g113140


Description : Nuclear ribonuclease Z (AHRD V3.3 *** A0A0B0P2G1_GOSAR)


Gene families : OG_42_0002756 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002756_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g113140
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Seita.1G010500.1 No alias endoribonuclease *(RNase Z) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004871 obsolete signal transducer activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0007021 tubulin complex assembly IEP Predicted GO
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0048487 beta-tubulin binding IEP Predicted GO
MF GO:0051766 inositol trisphosphate kinase activity IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 69 270
No external refs found!