Seita.9G388100.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G388100.1
Cluster HCAA Clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
A4A49_36210 No alias zinc finger protein 5 0.03 Orthogroups_2024-Update
A4A49_42731 No alias zinc finger protein 4 0.03 Orthogroups_2024-Update
Glyma.13G369500 No alias zinc-finger protein 1 0.04 Orthogroups_2024-Update
Glyma.14G212000 No alias zinc finger protein 4 0.02 Orthogroups_2024-Update
HORVU4Hr1G013330.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
HORVU4Hr1G064150.1 No alias C2H2 subclass ZFP transcription factor 0.06 Orthogroups_2024-Update
HORVU6Hr1G080870.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
MA_57501g0010 No alias (at5g25160 : 119.0) Encodes a zinc finger protein... 0.04 Orthogroups_2024-Update
Seita.5G180100.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Seita.6G179600.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Seita.9G170900.1 No alias C2H2 subclass ZFP transcription factor 0.06 Orthogroups_2024-Update
Sobic.001G441500.2 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Sobic.007G151800.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030915 Smc5-Smc6 complex IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0106068 SUMO ligase complex IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!