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  5. Seita.9G394500.1

Seita.9G394500.1


Description : component *(MED26) of MEDIATOR transcription co-activator complex


Gene families : OG_42_0001427 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G394500.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
At5g05140 No alias Probable mediator of RNA polymerase II transcription... 0.03 Orthogroups_2024-Update
Bradi1g19810 No alias Transcription elongation factor (TFIIS) family protein 0.03 Orthogroups_2024-Update
Brara.J02683.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.03 Orthogroups_2024-Update
HORVU1Hr1G064830.4 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.05 Orthogroups_2024-Update
HORVU2Hr1G025710.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.05 Orthogroups_2024-Update
LOC_Os03g24950 No alias expressed protein 0.03 Orthogroups_2024-Update
PSME_00001572-RA No alias (at5g05140 : 233.0) Transcription elongation factor... 0.03 Orthogroups_2024-Update
Sobic.001G361700.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.04 Orthogroups_2024-Update
Sobic.002G394400.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.04 Orthogroups_2024-Update
Sobic.009G137800.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR017923 TFIIS_N 136 184
No external refs found!