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  5. Seita.9G408000.1

Seita.9G408000.1


Description : Unknown function


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G408000.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
At1g80110 No alias F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5] 0.02 Orthogroups_2024-Update
Bradi1g48273 No alias phloem protein 2-B11 0.03 Orthogroups_2024-Update
Bradi3g15160 No alias phloem protein 2-B1 0.05 Orthogroups_2024-Update
Brara.A01071.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g56760 No alias OsFBX66 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g56840 No alias OsFBX70 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10429303g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10429303g0020 No alias (at1g80110 : 157.0) phloem protein 2-B11 (PP2-B11);... 0.03 Orthogroups_2024-Update
MA_10435077g0020 No alias (at2g02240 : 98.6) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
MA_134768g0010 No alias (at1g80110 : 163.0) phloem protein 2-B11 (PP2-B11);... 0.03 Orthogroups_2024-Update
PSME_00005204-RA No alias (at2g02240 : 157.0) maternal effect embryo arrest 66... 0.05 Orthogroups_2024-Update
PSME_00014617-RA No alias (at1g09155 : 164.0) phloem protein 2-B15 (PP2-B15);... 0.04 Orthogroups_2024-Update
PSME_00019543-RA No alias (at5g24560 : 153.0) phloem protein 2-B12 (PP2-B12);... 0.02 Orthogroups_2024-Update
PSME_00052353-RA No alias (at2g02230 : 141.0) phloem protein 2-B1 (PP2-B1);... 0.04 Orthogroups_2024-Update
Seita.6G062100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G063500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G231200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G340500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G341100.2 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.005G119100.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sopen01g043520 No alias Phloem protein 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 209 391
No external refs found!