At4g40060

Description : HB16 [Source:UniProtKB/TrEMBL;Acc:A0A178V0P3]

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g40060
Cluster	HCCA clusters: Cluster_214

Target	Alias	Description	ECC score	Gene Family Method
At5g66700	No alias	Homeobox-leucine zipper protein ATHB-53...	0.03	Orthogroups_2024-Update
Bradi1g71930	No alias	homeobox 3	0.03	Orthogroups_2024-Update
Bradi1g73190	No alias	Homeobox-leucine zipper protein family	0.03	Orthogroups_2024-Update
Brara.A00197.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B00590.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Brara.C00651.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G02462.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Brara.I04272.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os09g35910	No alias	homeobox associated leucine zipper, putative, expressed	0.04	Orthogroups_2024-Update
Seita.2G284000.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G258100.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Solyc02g087840	No alias	Homeobox associated leucine zipper protein (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc09g008810	No alias	Homeobox leucine zipper protein (AHRD V3.3 *** A0A072U315_MEDTR)	0.04	Orthogroups_2024-Update
Sopen04g001860	No alias	Homeobox associated leucine zipper	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Predicted GO
BP	GO:0006298	mismatch repair	IEP	Predicted GO
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predicted GO
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0015020	glucuronosyltransferase activity	IEP	Predicted GO
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Predicted GO
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Predicted GO
BP	GO:0016311	dephosphorylation	IEP	Predicted GO
MF	GO:0017016	Ras GTPase binding	IEP	Predicted GO
MF	GO:0017048	Rho GTPase binding	IEP	Predicted GO
MF	GO:0030983	mismatched DNA binding	IEP	Predicted GO
MF	GO:0031267	small GTPase binding	IEP	Predicted GO
MF	GO:0051020	GTPase binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	59	112
IPR003106	Leu_zip_homeo	114	155

External Links

No external refs found!

At4g40060

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation