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  5. Seita.9G418600.1

Seita.9G418600.1


Description : Unknown function


Gene families : OG_42_0009450 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009450_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G418600.1
Cluster HCAA Clusters: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
At3g51320 No alias Pentatricopeptide repeat-containing protein At3g51320... 0.03 Orthogroups_2024-Update
Bradi2g39487 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
Potri.005G109800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 168 191
IPR002885 Pentatricopeptide_repeat 299 321
IPR002885 Pentatricopeptide_repeat 329 355
IPR002885 Pentatricopeptide_repeat 225 264
No external refs found!