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  5. Seita.9G424000.1

Seita.9G424000.1


Description : regulatory subunit beta of SnRK1 kinase complex & regulatory subunit beta of SNF1-related SnRK1 kinase complex


Gene families : OG_42_0001630 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001630_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G424000.1
Cluster HCAA Clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
At5g21170 No alias 5'-AMP-activated protein kinase beta-2 subunit protein... 0.03 Orthogroups_2024-Update
Bradi1g64040 No alias 5\'-AMP-activated protein kinase beta-2 subunit protein 0.05 Orthogroups_2024-Update
GRMZM2G064725 No alias 5\'-AMP-activated protein kinase beta-2 subunit protein 0.03 Orthogroups_2024-Update
GRMZM2G148144 No alias 5\'-AMP-activated protein kinase beta-2 subunit protein 0.03 Orthogroups_2024-Update
Potri.001G220800 No alias 5\'-AMP-activated protein kinase beta-2 subunit protein 0.03 Orthogroups_2024-Update
Solyc05g054220 No alias SNF1-related kinase complex anchoring protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
BP GO:0006361 transcription initiation from RNA polymerase I promoter IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0140223 general transcription initiation factor activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 118 197
IPR006828 ASC_dom 231 298
No external refs found!