Seita.9G437500.1

Description : component *(eS7) of small ribosomal-subunit (SSU) proteome

Gene families : OG_42_0002228 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002228_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.9G437500.1
Cluster	HCAA Clusters: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
148446	No alias	Ribosomal protein S7e family protein	0.09	Orthogroups_2024-Update
A4A49_59553	No alias	40s ribosomal protein s7-1	0.05	Orthogroups_2024-Update
At1g48830	No alias	40S ribosomal protein S7 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF0]	0.09	Orthogroups_2024-Update
Bradi1g65150	No alias	Ribosomal protein S7e family protein	0.23	Orthogroups_2024-Update
Bradi3g23310	No alias	Ribosomal protein S7e family protein	0.17	Orthogroups_2024-Update
Brara.A03880.1	No alias	component *(eS7) of small ribosomal-subunit (SSU) proteome	0.13	Orthogroups_2024-Update
Brara.B00641.1	No alias	component *(eS7) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Brara.C00708.1	No alias	component *(eS7) of small ribosomal-subunit (SSU) proteome	0.14	Orthogroups_2024-Update
Brara.C02996.1	No alias	component *(eS7) of small ribosomal-subunit (SSU) proteome	0.26	Orthogroups_2024-Update
Brara.E03571.1	No alias	component *(eS7) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Brara.J01899.1	No alias	component *(eS7) of small ribosomal-subunit (SSU) proteome	0.24	Orthogroups_2024-Update
Cre12.g498900	No alias	Ribosomal protein S7e family protein	0.2	Orthogroups_2024-Update
GRMZM2G030016	No alias	Ribosomal protein S7e family protein	0.09	Orthogroups_2024-Update
Glyma.05G238000	No alias	Ribosomal protein S7e family protein	0.19	Orthogroups_2024-Update
Glyma.07G092900	No alias	Ribosomal protein S7e family protein	0.11	Orthogroups_2024-Update
Glyma.08G045100	No alias	Ribosomal protein S7e family protein	0.21	Orthogroups_2024-Update
Glyma.09G183300	No alias	Ribosomal protein S7e family protein	0.21	Orthogroups_2024-Update
Glyma.13G045800	No alias	Ribosomal protein S7e family protein	0.06	Orthogroups_2024-Update
Glyma.19G049200	No alias	Ribosomal protein S7e family protein	0.23	Orthogroups_2024-Update
HORVU1Hr1G029870.1	No alias	component *(eS7) of small ribosomal-subunit (SSU) proteome	0.18	Orthogroups_2024-Update
HORVU4Hr1G055230.1	No alias	component *(eS7) of small ribosomal-subunit (SSU) proteome	0.14	Orthogroups_2024-Update
Kfl00437_0020	kfl00437_0020_v1.1	(at1g48830 : 254.0) Ribosomal protein S7e family...	0.06	Orthogroups_2024-Update
LOC_Os05g27940	No alias	40S ribosomal protein S7, putative, expressed	0.03	Orthogroups_2024-Update
Mp6g08120.1	No alias	component RPS7 of SSU proteome	0.15	Orthogroups_2024-Update
PSME_00000777-RA	No alias	(q9xet4\|rs7_secce : 317.0) 40S ribosomal protein S7 -...	0.03	Orthogroups_2024-Update
Potri.006G087900	No alias	Ribosomal protein S7e family protein	0.08	Orthogroups_2024-Update
Pp1s134_167V6	No alias	40s ribosomal protein expressed	0.12	Orthogroups_2024-Update
Pp1s152_7V6	No alias	40s ribosomal protein expressed	0.25	Orthogroups_2024-Update
Pp1s365_30V6	No alias	40S ribosomal protein S7 [Brassica oleracea]	0.1	Orthogroups_2024-Update
Pp1s49_260V6	No alias	40s ribosomal protein	0.15	Orthogroups_2024-Update
Seita.3G280800.1	No alias	component *(eS7) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Sobic.001G403500.1	No alias	component *(eS7) of small ribosomal-subunit (SSU) proteome	0.34	Orthogroups_2024-Update
Sobic.009G101700.2	No alias	component *(eS7) of small ribosomal-subunit (SSU) proteome	0.29	Orthogroups_2024-Update
Solyc03g119360	No alias	40S ribosomal protein S7-like protein (AHRD V3.3 ***...	0.21	Orthogroups_2024-Update
Solyc06g069090	No alias	40S ribosomal protein S7-like protein (AHRD V3.3 ***...	0.22	Orthogroups_2024-Update
Sopen03g038230	No alias	Ribosomal protein S7e	0.17	Orthogroups_2024-Update
Sopen06g026370	No alias	Ribosomal protein S7e	0.3	Orthogroups_2024-Update
evm.model.contig_2068.1	No alias	(at1g48830 : 206.0) Ribosomal protein S7e family...	0.29	Orthogroups_2024-Update
evm.model.tig00021682.9	No alias	(q9xet4\|rs7_secce : 233.0) 40S ribosomal protein S7 -...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
BP	GO:0006325	chromatin organization	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
BP	GO:0006400	tRNA modification	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
MF	GO:0008237	metallopeptidase activity	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0022607	cellular component assembly	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0030488	tRNA methylation	IEP	Predicted GO
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	Predicted GO
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Predicted GO
CC	GO:0034708	methyltransferase complex	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043527	tRNA methyltransferase complex	IEP	Predicted GO
BP	GO:0043933	protein-containing complex subunit organization	IEP	Predicted GO
BP	GO:0065003	protein-containing complex assembly	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000554	Ribosomal_S7e	7	186

External Links

No external refs found!

Seita.9G437500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation