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  5. Seita.9G440500.1

Seita.9G440500.1


Description : clade B phosphatase


Gene families : OG_42_0000847 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000847_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G440500.1
Cluster HCAA Clusters: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
13829 No alias Protein phosphatase 2C family protein 0.02 Orthogroups_2024-Update
A4A49_30385 No alias putative protein phosphatase 2c 25 0.04 Orthogroups_2024-Update
A4A49_39253 No alias putative protein phosphatase 2c 25 0.05 Orthogroups_2024-Update
AC208201.3_FG002 No alias Protein phosphatase 2C family protein 0.06 Orthogroups_2024-Update
Brara.C02062.1 No alias clade B phosphatase 0.04 Orthogroups_2024-Update
Brara.D02437.1 No alias clade B phosphatase 0.03 Orthogroups_2024-Update
Brara.E00564.1 No alias clade B phosphatase 0.05 Orthogroups_2024-Update
GRMZM2G000603 No alias Protein phosphatase 2C family protein 0.05 Orthogroups_2024-Update
GRMZM2G465287 No alias Protein phosphatase 2C family protein 0.04 Orthogroups_2024-Update
LOC_Os03g18150 No alias protein phosphatase 2C, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os12g09640 No alias protein phosphatase 2C, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426697g0020 No alias (at1g07160 : 330.0) Protein phosphatase 2C family... 0.04 Orthogroups_2024-Update
MA_10429333g0010 No alias (at2g30020 : 329.0) Encodes AP2C1. Belongs to the clade... 0.04 Orthogroups_2024-Update
MA_10430806g0010 No alias (at2g30020 : 142.0) Encodes AP2C1. Belongs to the clade... 0.04 Orthogroups_2024-Update
MA_10431780g0010 No alias (at2g30020 : 326.0) Encodes AP2C1. Belongs to the clade... 0.04 Orthogroups_2024-Update
MA_183946g0010 No alias (at2g30020 : 299.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
MA_3395g0010 No alias (at2g30020 : 322.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
PSME_00023716-RA No alias (at2g30020 : 301.0) Encodes AP2C1. Belongs to the clade... 0.06 Orthogroups_2024-Update
PSME_00033474-RA No alias (at2g30020 : 310.0) Encodes AP2C1. Belongs to the clade... 0.05 Orthogroups_2024-Update
PSME_00034948-RA No alias (at2g30020 : 319.0) Encodes AP2C1. Belongs to the clade... 0.05 Orthogroups_2024-Update
PSME_00040514-RA No alias (at2g30020 : 329.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
PSME_00040607-RA No alias (at2g30020 : 331.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
PSME_00047258-RA No alias (at2g30020 : 317.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
Potri.001G278500 No alias Protein phosphatase 2C family protein 0.02 Orthogroups_2024-Update
Potri.008G070400 No alias phosphatase 2C5 0.03 Orthogroups_2024-Update
Sobic.001G406300.1 No alias clade B phosphatase 0.08 Orthogroups_2024-Update
Sobic.005G087800.1 No alias clade B phosphatase 0.11 Orthogroups_2024-Update
Solyc05g052520 No alias Protein phosphatase 2C family protein (AHRD V3.3 *** AT1G07160.1) 0.02 Orthogroups_2024-Update
Solyc06g007190 No alias Protein phosphatase 2C (AHRD V3.3 *** Q3V656_SOLTU) 0.04 Orthogroups_2024-Update
Sopen05g031070 No alias Protein phosphatase 2C 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 136 372
No external refs found!