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  5. Seita.9G443300.1

Seita.9G443300.1


Description : AS2/LOB-type transcription factor


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G443300.1
Cluster HCAA Clusters: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
A4A49_10474 No alias lob domain-containing protein 25 0.05 Orthogroups_2024-Update
At2g30130 No alias PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1] 0.04 Orthogroups_2024-Update
At3g27650 No alias LOB domain-containing protein 25... 0.05 Orthogroups_2024-Update
Bradi1g65760 No alias LOB domain-containing protein 1 0.03 Orthogroups_2024-Update
Bradi2g53690 No alias LOB domain-containing protein 13 0.04 Orthogroups_2024-Update
Brara.C02407.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Brara.D02463.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Brara.F01152.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G00548.1 No alias AS2/LOB-type transcription factor 0.05 Orthogroups_2024-Update
Brara.G01383.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G154320 No alias ASYMMETRIC LEAVES 2-like 1 0.03 Orthogroups_2024-Update
GRMZM2G447176 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.06G178900 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.11G232667 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.15G045200 No alias LOB domain-containing protein 11 0.04 Orthogroups_2024-Update
Glyma.15G228100 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.17G086300 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Orthogroups_2024-Update
Glyma.18G024400 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G084750.2 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g07480 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g41600 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10429262g0010 No alias (at5g63090 : 192.0) Involved in lateral organ... 0.03 Orthogroups_2024-Update
MA_10434782g0020 No alias (at1g65620 : 214.0) Required for formation of a... 0.03 Orthogroups_2024-Update
MA_19975g0010 No alias (at2g28500 : 96.3) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
MA_451290g0010 No alias (at1g07900 : 140.0) LOB domain-containing protein 1... 0.05 Orthogroups_2024-Update
MA_84752g0010 No alias (at2g40470 : 201.0) LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
MA_902082g0010 No alias (at1g07900 : 123.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
MA_9412105g0010 No alias (at2g40470 : 200.0) LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
MA_9924708g0010 No alias (at1g31320 : 131.0) LOB domain-containing protein 4... 0.03 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
PSME_00022332-RA No alias (at2g40470 : 197.0) LOB domain-containing protein 15... 0.05 Orthogroups_2024-Update
PSME_00022409-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
PSME_00028054-RA No alias (at1g07900 : 124.0) LOB domain-containing protein 1... 0.04 Orthogroups_2024-Update
PSME_00039447-RA No alias (at2g28500 : 163.0) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
PSME_00043149-RA No alias (at1g07900 : 141.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
PSME_00048913-RA No alias (at2g28500 : 129.0) LOB domain-containing protein 11... 0.07 Orthogroups_2024-Update
PSME_00056008-RA No alias (at2g30130 : 185.0) Overexpression/activation tagged... 0.03 Orthogroups_2024-Update
Potri.003G039700 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Pp1s12_355V6 No alias ramosa 2 0.02 Orthogroups_2024-Update
Pp1s170_78V6 No alias Protein LATERAL ORGAN BOUNDARIES [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s73_7V6 No alias lob domain-containing 0.03 Orthogroups_2024-Update
Sobic.001G409200.1 No alias AS2/LOB-type transcription factor 0.06 Orthogroups_2024-Update
Sobic.003G383700.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g044520 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc05g048740 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g064540 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g071660 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc11g045530 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen02g031200 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 64 161
No external refs found!