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  5. Seita.9G449200.1

Seita.9G449200.1


Description : component *(PnsL1) of NDH lumen subcomplex L


Gene families : OG_42_0003179 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G449200.1
Cluster HCAA Clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
A4A49_33746 No alias psbp-like protein 1, chloroplastic 0.06 Orthogroups_2024-Update
Bradi1g66296 No alias PsbP-like protein 2 0.02 Orthogroups_2024-Update
Bradi1g77047 No alias PsbP-like protein 1 0.08 Orthogroups_2024-Update
Brara.D00407.1 No alias protein involved in PS-II repair *(PPL1) 0.02 Orthogroups_2024-Update
Cre12.g509050 No alias PsbP-like protein 1 0.03 Orthogroups_2024-Update
Glyma.02G094900 No alias PsbP-like protein 1 0.04 Orthogroups_2024-Update
Kfl00496_0080 kfl00496_0080_v1.1 (at3g55330 : 177.0) PsbP-like protein 1 (PPL1);... 0.05 Orthogroups_2024-Update
Mp2g21180.1 No alias PPL1 protein involved in PS-II assembly 0.02 Orthogroups_2024-Update
Potri.010G210200 No alias PsbP-like protein 1 0.05 Orthogroups_2024-Update
Sobic.001G415400.1 No alias component *(PnsL1) of NDH lumen subcomplex L 0.11 Orthogroups_2024-Update
Solyc03g114930 No alias photosystem II reaction center PsbP family protein 0.03 Orthogroups_2024-Update
Solyc10g054420 No alias PsbP-like protein 2 (AHRD V3.3 *** A0A061FNQ0_THECC) 0.02 Orthogroups_2024-Update
Sopen03g034010 No alias PsbP 0.03 Orthogroups_2024-Update
evm.model.contig_4487.13 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
CC GO:0009523 photosystem II IEA 16Dec
CC GO:0009654 photosystem II oxygen evolving complex IEA 16Dec
BP GO:0015979 photosynthesis IEA 16Dec
CC GO:0019898 extrinsic component of membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
MF GO:0070567 cytidylyltransferase activity IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002683 PsbP 79 227
No external refs found!