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  5. Seita.9G451000.1

Seita.9G451000.1


Description : UDP-L-rhamnose synthase *(RHM)


Gene families : OG_42_0000886 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000886_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G451000.1
Cluster HCAA Clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Brara.E02654.1 No alias UDP-L-rhamnose synthase *(RHM) 0.02 Orthogroups_2024-Update
Glyma.08G148100 No alias rhamnose biosynthesis 1 0.02 Orthogroups_2024-Update
PSME_00018936-RA No alias (at1g63000 : 514.0) nucleotide-rhamnose... 0.02 Orthogroups_2024-Update
PSME_00054864-RA No alias (at3g14790 : 335.0) rhamnose biosynthesis 3 (RHM3);... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 10 315
IPR029903 RmlD-like-bd 386 557
No external refs found!