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  5. Seita.9G451100.1

Seita.9G451100.1


Description : UDP-L-rhamnose synthase *(RHM)


Gene families : OG_42_0000886 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000886_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G451100.1
Cluster HCAA Clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Brara.E01485.1 No alias UDP-L-rhamnose synthase *(RHM) 0.03 Orthogroups_2024-Update
Brara.F00115.1 No alias UDP-L-rhamnose synthase *(RHM) 0.05 Orthogroups_2024-Update
Cre02.g083800 No alias rhamnose biosynthesis 1 0.02 Orthogroups_2024-Update
Cre09.g387171 No alias nucleotide-rhamnose synthase/epimerase-reductase 0.02 Orthogroups_2024-Update
Glyma.08G148100 No alias rhamnose biosynthesis 1 0.02 Orthogroups_2024-Update
HORVU5Hr1G007050.2 No alias UDP-L-rhamnose synthase *(RHM) 0.03 Orthogroups_2024-Update
Kfl00409_0080 kfl00409_0080_v1.1 (at1g53500 : 1034.0) encodes a putative NDP-L-rhamnose... 0.03 Orthogroups_2024-Update
Mp1g04880.1 No alias UDP-L-rhamnose synthase 0.05 Orthogroups_2024-Update
PSME_00018936-RA No alias (at1g63000 : 514.0) nucleotide-rhamnose... 0.03 Orthogroups_2024-Update
PSME_00056062-RA No alias (at1g78570 : 1136.0) Encodes a UDP-L-Rhamnose synthase... 0.03 Orthogroups_2024-Update
Potri.011G103700 No alias rhamnose biosynthesis 1 0.02 Orthogroups_2024-Update
Pp1s194_128V6 No alias rhamnose synthase 0.03 Orthogroups_2024-Update
Pp1s195_8V6 No alias rhamnose synthase 0.02 Orthogroups_2024-Update
Pp1s88_1V6 No alias rhamnose synthase 0.05 Orthogroups_2024-Update
Sobic.001G416600.1 No alias UDP-L-rhamnose synthase *(RHM) 0.03 Orthogroups_2024-Update
Sobic.001G418000.2 No alias UDP-L-rhamnose synthase *(RHM) 0.03 Orthogroups_2024-Update
Sobic.004G282700.1 No alias dTDP-rhamnose synthase *(NRS-ER) 0.02 Orthogroups_2024-Update
Solyc07g062130 No alias Trifunctional UDP-glucose... 0.02 Orthogroups_2024-Update
evm.model.tig00021464.17 No alias (at1g53500 : 393.0) encodes a putative NDP-L-rhamnose... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 10 315
IPR029903 RmlD-like-bd 387 558
No external refs found!