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  5. Seita.9G465900.1

Seita.9G465900.1


Description : E3 ubiquitin ligase *(LOG2/LUL)


Gene families : OG_42_0001257 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G465900.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Cre03.g145847 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
HORVU0Hr1G008700.1 No alias E3 ubiquitin ligase *(LOG2/LUL) 0.04 Orthogroups_2024-Update
PSME_00003205-RA No alias (at3g09770 : 323.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.006G128700 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!