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  5. Seita.9G471200.1

Seita.9G471200.1


Description : Unknown function


Gene families : OG_42_0001554 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001554_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G471200.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Bradi1g68390 No alias proline-rich protein 4 0.04 Orthogroups_2024-Update
Bradi3g20970 No alias proline-rich protein 2 0.04 Orthogroups_2024-Update
Brara.D01248.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G003909 No alias proline-rich protein 2 0.05 Orthogroups_2024-Update
LOC_Os10g05820 No alias POEI5 - Pollen Ole e I allergen and extensin family... 0.03 Orthogroups_2024-Update
LOC_Os10g05950 No alias POEI11 - Pollen Ole e I allergen and extensin family... 0.03 Orthogroups_2024-Update
LOC_Os10g05990 No alias POEI14 - Pollen Ole e I allergen and extensin family... 0.02 Orthogroups_2024-Update
Seita.9G287500.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!