1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G478600.1

Seita.9G478600.1


Description : manganese cation transporter *(Mn-CDF) & manganese cation transporter *(Mn-CDF)


Gene families : OG_42_0000596 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G478600.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G206600 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G078910.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.03 Orthogroups_2024-Update
Potri.003G215600 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
Potri.010G211300 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
Sobic.001G445000.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA 16Dec
MF GO:0008324 cation transmembrane transporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
CC GO:0019008 molybdopterin synthase complex IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027470 Cation_efflux_CTD 308 382
IPR002524 Cation_efflux 110 302
No external refs found!