1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G482100.1

Seita.9G482100.1


Description : squalene epoxidase & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen


Gene families : OG_42_0003060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003060_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G482100.1
Cluster HCAA Clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Bradi1g69170 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.03 Orthogroups_2024-Update
Glyma.08G063700 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.03 Orthogroups_2024-Update
LOC_Os03g12910 No alias squalene monooxygenase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00037948-RA No alias (o48651|erg1_pangi : 428.0) Squalene monooxygenase (EC... 0.05 Orthogroups_2024-Update
evm.model.tig00000042.5 No alias (at4g37760 : 401.0) squalene epoxidase 3 (SQE3);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004506 squalene monooxygenase activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013698 Squalene_epoxidase 220 492
No external refs found!