1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G516600.1

Seita.9G516600.1


Description : subgroup ERF-VII transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G516600.1
Cluster HCAA Clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Bradi2g50035 No alias ethylene responsive element binding factor 2 0.04 Orthogroups_2024-Update
Bradi3g50620 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.F00133.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.J00612.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G148333 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G137600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G007050.2 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G078150.2 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
LOC_Os05g41780 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10435354g0010 No alias (at1g19210 : 88.6) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
PSME_00052455-RA No alias (at1g19210 : 114.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.001G110500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G104200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s105_212V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s127_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G227400.2 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G145000.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Solyc06g050520 No alias dehydration responsive element binding protein 1 0.04 Orthogroups_2024-Update
Solyc08g078180 No alias Ethylene Response Factor A.1 0.04 Orthogroups_2024-Update
Sopen02g035400 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen03g024410 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen07g027720 No alias AP2 domain 0.06 Orthogroups_2024-Update
Sopen08g026670 No alias AP2 domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 74 123
No external refs found!