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  5. Seita.9G516900.1

Seita.9G516900.1


Description : component *(eIF3k) of eIF3 mRNA-to-PIC binding complex


Gene families : OG_42_0005640 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005640_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G516900.1
Cluster HCAA Clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
A4A49_35747 No alias eukaryotic translation initiation factor 3 subunit k 0.03 Orthogroups_2024-Update
At4g33250 No alias Eukaryotic translation initiation factor 3 subunit K... 0.04 Orthogroups_2024-Update
Brara.A00468.1 No alias component *(eIF3k) of eIF3 mRNA-to-PIC binding complex 0.05 Orthogroups_2024-Update
Brara.H01275.1 No alias component *(eIF3k) of eIF3 mRNA-to-PIC binding complex 0.09 Orthogroups_2024-Update
Glyma.13G114300 No alias eukaryotic translation initiation factor 3K 0.05 Orthogroups_2024-Update
Glyma.17G045500 No alias eukaryotic translation initiation factor 3K 0.04 Orthogroups_2024-Update
Potri.006G136500 No alias eukaryotic translation initiation factor 3K 0.03 Orthogroups_2024-Update
Sobic.001G481700.1 No alias component *(eIF3k) of eIF3 mRNA-to-PIC binding complex 0.13 Orthogroups_2024-Update
Solyc07g042570 No alias Eukaryotic translation initiation factor 3 subunit K... 0.06 Orthogroups_2024-Update
Sopen07g022260 No alias SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.04 Orthogroups_2024-Update
evm.model.contig_2055.2 No alias (q94hf1|if3c_orysa : 108.0) Eukaryotic translation... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003724 RNA helicase activity IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR033464 CSN8_PSD8_EIF3K 64 189
No external refs found!