At5g01930

Description : Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]

Gene families : OG_42_0000309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g01930
Cluster	HCCA clusters: Cluster_242

Target	Alias	Description	ECC score	Gene Family Method
Bradi4g44336	No alias	Glycosyl hydrolase superfamily protein	0.02	Orthogroups_2024-Update
MA_6558g0010	No alias	(at5g01930 : 532.0) Glycosyl hydrolase superfamily...	0.03	Orthogroups_2024-Update
Potri.005G120500	No alias	Glycosyl hydrolase superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G109900	No alias	Glycosyl hydrolase superfamily protein	0.03	Orthogroups_2024-Update
Seita.5G316000.1	No alias	endo-beta-1,4-mannanase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0007010	cytoskeleton organization	IEP	Predicted GO
BP	GO:0007034	vacuolar transport	IEP	Predicted GO
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
MF	GO:0017056	structural constituent of nuclear pore	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001547	Glyco_hydro_5	58	359

External Links

No external refs found!