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  5. Seita.9G537100.1

Seita.9G537100.1


Description : Unknown function


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G537100.1
Cluster HCAA Clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
232017 No alias 4-coumarate:CoA ligase 3 0.04 Orthogroups_2024-Update
At1g65060 No alias 4-coumarate--CoA ligase 3... 0.03 Orthogroups_2024-Update
At4g05160 No alias 4-coumarate--CoA ligase-like 7... 0.02 Orthogroups_2024-Update
Bradi1g31320 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
Bradi3g37300 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
GRMZM2G055320 No alias 4-coumarate:CoA ligase 2 0.02 Orthogroups_2024-Update
Glyma.17G064600 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
HORVU7Hr1G111130.3 No alias p-coumarate 0.04 Orthogroups_2024-Update
MA_135674g0010 No alias (at4g05160 : 371.0) Encodes a peroxisomal protein... 0.03 Orthogroups_2024-Update
PSME_00019639-RA No alias (at1g20510 : 494.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.04 Orthogroups_2024-Update
PSME_00022472-RA No alias (at1g20510 : 519.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
Potri.017G035100 No alias OPC-8:0 CoA ligase1 0.02 Orthogroups_2024-Update
Sopen03g030320 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update
Sopen08g024910 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 41 456
IPR025110 AMP-bd_C 465 540
No external refs found!