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  5. Seita.9G537200.1

Seita.9G537200.1


Description : Unknown function


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G537200.1
Cluster HCAA Clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
171251 No alias 4-coumarate:CoA ligase 2 0.02 Orthogroups_2024-Update
A4A49_10638 No alias 4-coumarate--coa ligase 2 0.02 Orthogroups_2024-Update
At1g65060 No alias 4-coumarate--CoA ligase 3... 0.02 Orthogroups_2024-Update
Bradi5g04760 No alias acyl-CoA synthetase 5 0.02 Orthogroups_2024-Update
GRMZM2G122787 No alias AMP-dependent synthetase and ligase family protein 0.04 Orthogroups_2024-Update
Glyma.06G171900 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Glyma.11G091600 No alias 4-coumarate:CoA ligase 3 0.03 Orthogroups_2024-Update
Glyma.14G223200 No alias OPC-8:0 CoA ligase1 0.02 Orthogroups_2024-Update
HORVU4Hr1G081940.3 No alias OPC-8 0.03 Orthogroups_2024-Update
PSME_00015568-RA No alias (o24146|4cl2_tobac : 707.0) 4-coumarate--CoA ligase 2... 0.02 Orthogroups_2024-Update
PSME_00042414-RA No alias (at1g20510 : 636.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
Potri.010G057000 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Sobic.010G214900.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Solyc12g042460 No alias 4-coumarate--CoA ligase-like 0.04 Orthogroups_2024-Update
Sopen03g001090 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update
Sopen03g036780 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update
Sopen06g025930 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update
Sopen12g031420 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 39 447
IPR025110 AMP-bd_C 456 531
No external refs found!