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  5. Seita.9G551900.1

Seita.9G551900.1


Description : alpha-like-class expansin


Gene families : OG_42_0003075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G551900.1
Cluster HCAA Clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
A4A49_29774 No alias expansin-like a2 0.02 Orthogroups_2024-Update
Bradi1g76260 No alias expansin-like A1 0.03 Orthogroups_2024-Update
Brara.A00006.1 No alias alpha-like-class expansin 0.04 Orthogroups_2024-Update
Glyma.11G096700 No alias expansin-like A1 0.03 Orthogroups_2024-Update
Glyma.12G022800 No alias expansin-like A1 0.03 Orthogroups_2024-Update
HORVU4Hr1G081800.6 No alias alpha-like-class expansin 0.03 Orthogroups_2024-Update
Sobic.001G311000.1 No alias alpha-like-class expansin 0.05 Orthogroups_2024-Update
Sopen01g054050 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 70 146
IPR007117 Expansin_CBD 160 242
No external refs found!