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  5. Seita.9G561800.1

Seita.9G561800.1


Description : protein involved in PS-II repair *(PPL1)


Gene families : OG_42_0003179 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G561800.1
Cluster HCAA Clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
A4A49_33746 No alias psbp-like protein 1, chloroplastic 0.04 Orthogroups_2024-Update
Bradi1g66296 No alias PsbP-like protein 2 0.04 Orthogroups_2024-Update
Bradi1g77047 No alias PsbP-like protein 1 0.07 Orthogroups_2024-Update
Brara.D00407.1 No alias protein involved in PS-II repair *(PPL1) 0.03 Orthogroups_2024-Update
Cre12.g509050 No alias PsbP-like protein 1 0.04 Orthogroups_2024-Update
GRMZM2G176840 No alias PsbP-like protein 1 0.02 Orthogroups_2024-Update
Glyma.02G094900 No alias PsbP-like protein 1 0.04 Orthogroups_2024-Update
HORVU4Hr1G000230.1 No alias protein involved in PS-II repair *(PPL1) 0.02 Orthogroups_2024-Update
Kfl00496_0080 kfl00496_0080_v1.1 (at3g55330 : 177.0) PsbP-like protein 1 (PPL1);... 0.05 Orthogroups_2024-Update
Potri.010G210200 No alias PsbP-like protein 1 0.04 Orthogroups_2024-Update
Sobic.001G415400.1 No alias component *(PnsL1) of NDH lumen subcomplex L 0.06 Orthogroups_2024-Update
Sobic.001G527000.1 No alias protein involved in PS-II repair *(PPL1) 0.06 Orthogroups_2024-Update
Solyc03g114930 No alias photosystem II reaction center PsbP family protein 0.03 Orthogroups_2024-Update
Sopen03g034010 No alias PsbP 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
CC GO:0009523 photosystem II IEA 16Dec
CC GO:0009654 photosystem II oxygen evolving complex IEA 16Dec
BP GO:0015979 photosynthesis IEA 16Dec
CC GO:0019898 extrinsic component of membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002683 PsbP 65 213
No external refs found!