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  5. Seita.9G565000.1

Seita.9G565000.1


Description : Unknown function


Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G565000.1
Cluster HCAA Clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
427468 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
80819 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
A4A49_18141 No alias protein hothead 0.03 Orthogroups_2024-Update
Brara.I03848.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G434500 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
PSME_00029110-RA No alias (at1g72970 : 214.0) Originally identified as a mutation... 0.02 Orthogroups_2024-Update
PSME_00032064-RA No alias (at1g12570 : 349.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00051118-RA No alias (at5g51950 : 373.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
Solyc06g035580 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 454 603
IPR000172 GMC_OxRdtase_N 51 326
No external refs found!