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  5. Seita.9G573100.1

Seita.9G573100.1


Description : Unknown function


Gene families : OG_42_0007991 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G573100.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
At3g06980 No alias DEAD-box ATP-dependent RNA helicase 50... 0.04 Orthogroups_2024-Update
Bradi4g13830 No alias DEA(D/H)-box RNA helicase family protein 0.08 Orthogroups_2024-Update
Cre10.g436650 No alias DEA(D/H)-box RNA helicase family protein 0.02 Orthogroups_2024-Update
GRMZM2G113267 No alias DEA(D/H)-box RNA helicase family protein 0.03 Orthogroups_2024-Update
Glyma.04G002600 No alias DEA(D/H)-box RNA helicase family protein 0.06 Orthogroups_2024-Update
Kfl00226_0050 kfl00226_0050_v1.1 (at3g06980 : 357.0) DEA(D/H)-box RNA helicase family... 0.02 Orthogroups_2024-Update
Potri.010G004700 No alias DEA(D/H)-box RNA helicase family protein 0.03 Orthogroups_2024-Update
Sopen11g020630 No alias DEAD/DEAH box helicase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 498 613
IPR011545 DEAD/DEAH_box_helicase_dom 275 448
No external refs found!