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  5. Seita.9G574800.1

Seita.9G574800.1


Description : putative silicon efflux transporter *(LSI2)


Gene families : OG_42_0001194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G574800.1
Cluster HCAA Clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Bradi1g78100 No alias Divalent ion symporter 0.02 Orthogroups_2024-Update
GRMZM2G347174 No alias Divalent ion symporter 0.03 Orthogroups_2024-Update
HORVU1Hr1G024100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os10g31040 No alias Citrate transporter protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00051857-RA No alias (at1g02260 : 561.0) Divalent ion symporter; FUNCTIONS... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 29 415
No external refs found!