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  5. At5g02620

At5g02620


Description : ankyrin-like1 [Source:TAIR;Acc:AT5G02620]


Gene families : OG_42_0000679 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000679_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g02620
Cluster HCCA clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Brara.D01929.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.11G145227 No alias Ankyrin repeat family protein 0.04 Orthogroups_2024-Update
PSME_00023718-RA No alias (at3g12360 : 575.0) Encodes a protein with an ankyrin... 0.05 Orthogroups_2024-Update
Sobic.001G414500.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 344 459
IPR002110 Ankyrin_rpt 227 245
IPR020683 Ankyrin_rpt-contain_dom 16 78
IPR020683 Ankyrin_rpt-contain_dom 85 151
IPR020683 Ankyrin_rpt-contain_dom 157 222
No external refs found!