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  5. Seita.J024800.1

Seita.J024800.1


Description : Unknown function


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.J024800.1
Cluster HCAA Clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
A4A49_23434 No alias putative disease resistance protein rga3 0.03 Orthogroups_2024-Update
Glyma.02G184300 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Glyma.03G048301 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Orthogroups_2024-Update
Glyma.09G020600 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Glyma.19G138301 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G094980.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g20720 No alias CC-NBS-LRR, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g45690 No alias symbiosis-related disease resistance protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os07g10560 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os08g43000 No alias CC-NBS-LRR, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g43010 No alias disease resistance RPP13-like protein 1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g04090 No alias disease resistance RPP13-like protein 1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g10570 No alias NBS-LRR disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g10770 No alias disease resistance protein RGA3, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G198900 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 Orthogroups_2024-Update
Potri.003G200120 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.003G200800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.006G272066 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.006G274300 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.017G121700 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.017G137851 No alias target of AVRB operation1 0.03 Orthogroups_2024-Update
Seita.6G233400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G235800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G234500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G235200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g084450 No alias Disease resistance protein (AHRD V3.3 *** A0A124SFK9_CYNCS) 0.02 Orthogroups_2024-Update
Solyc11g069930 No alias Disease resistance protein (AHRD V3.3 *-* B3IYJ6_CAPCH) 0.04 Orthogroups_2024-Update
Solyc11g072000 No alias Disease resistance protein (AHRD V3.3 *-* B3IYJ6_CAPCH) 0.03 Orthogroups_2024-Update
Sopen01g034940 No alias NB-ARC domain 0.02 Orthogroups_2024-Update
Sopen08g024640 No alias NB-ARC domain 0.04 Orthogroups_2024-Update
Sopen11g030020 No alias Leucine rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 371 390
IPR002182 NB-ARC 10 99
No external refs found!