"sequence_id","alias","species","description","type" "77425","No alias","Selaginella moellendorffii ","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "84724","No alias","Selaginella moellendorffii ","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "A4A49_19542","No alias","Nicotiana attenuata","polyribonucleotide nucleotidyltransferase 2, mitochondrial","protein_coding" "A4A49_24182","No alias","Nicotiana attenuata","putative polyribonucleotide nucleotidyltransferase 1, chloroplastic","protein_coding" "At3g03710","No alias","Arabidopsis thaliana","Polyribonucleotide nucleotidyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GZQ3]","protein_coding" "At5g14580","No alias","Arabidopsis thaliana","Polyribonucleotide nucleotidyltransferase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S7G6]","protein_coding" "Bradi1g56280","No alias","Brachypodium distachyon","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "Bradi3g48860","No alias","Brachypodium distachyon","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "Brara.C00633.1","No alias","Brassica rapa","phosphorolytic exoribonuclease *(PNP) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.C03030.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group & phosphorolytic exoribonuclease *(PNP)","protein_coding" "Brara.E03499.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group & phosphorolytic exoribonuclease *(PNP)","protein_coding" "Brara.H01357.1","No alias","Brassica rapa","phosphorolytic exoribonuclease *(PNP) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.J02010.1","No alias","Brassica rapa","phosphorolytic exoribonuclease *(PNP) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Cre04.g214501","No alias","Chlamydomonas reinhardtii","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "evm.model.contig_2150.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2150.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4410.4","No alias","Porphyridium purpureum","(at3g03710 : 563.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (reliability: 1126.0) & (original description: no original description)","protein_coding" "evm.model.contig_647.2","No alias","Porphyridium purpureum","(at3g03710 : 164.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description)","protein_coding" "evm.model.tig00020603.85","No alias","Cyanophora paradoxa","(at5g14580 : 224.0) polyribonucleotide nucleotidyltransferase, putative; FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: mRNA catabolic process, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT3G03710.1); Has 30004 Blast hits to 26962 proteins in 2901 species: Archae - 317; Bacteria - 19794; Metazoa - 489; Fungi - 141; Plants - 452; Viruses - 0; Other Eukaryotes - 8811 (source: NCBI BLink). & (reliability: 448.0) & (original description: no original description)","protein_coding" "evm.model.tig00020603.86","No alias","Cyanophora paradoxa","(at5g14580 : 112.0) polyribonucleotide nucleotidyltransferase, putative; FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: mRNA catabolic process, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT3G03710.1); Has 30004 Blast hits to 26962 proteins in 2901 species: Archae - 317; Bacteria - 19794; Metazoa - 489; Fungi - 141; Plants - 452; Viruses - 0; Other Eukaryotes - 8811 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description)","protein_coding" "evm.model.tig00021073.40","No alias","Cyanophora paradoxa","(at5g14580 : 307.0) polyribonucleotide nucleotidyltransferase, putative; FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: mRNA catabolic process, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT3G03710.1); Has 30004 Blast hits to 26962 proteins in 2901 species: Archae - 317; Bacteria - 19794; Metazoa - 489; Fungi - 141; Plants - 452; Viruses - 0; Other Eukaryotes - 8811 (source: NCBI BLink). & (reliability: 614.0) & (original description: no original description)","protein_coding" "Glyma.05G005200","No alias","Glycine max","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "Glyma.16G036100","No alias","Glycine max","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "Glyma.19G005800","No alias","Glycine max","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "Glyma.19G116700","No alias","Glycine max","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "GRMZM2G123868","No alias","Zea mays","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "GRMZM2G157336","No alias","Zea mays","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "GRMZM2G377761","No alias","Zea mays","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "GRMZM2G392798","No alias","Zea mays","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "HORVU2Hr1G056650.13","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group & phosphorolytic exoribonuclease *(PNP)","protein_coding" "HORVU2Hr1G056710.5","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group & phosphorolytic exoribonuclease *(PNP)","protein_coding" "HORVU6Hr1G057570.8","No alias","Hordeum vulgare","phosphorolytic exoribonuclease *(PNP) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Kfl00059_0100","kfl00059_0100_v1.1","Klebsormidium nitens","(at3g03710 : 796.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (reliability: 1592.0) & (original description: no original description)","protein_coding" "Kfl00519_0070","kfl00519_0070_v1.1","Klebsormidium nitens","(at5g14580 : 753.0) polyribonucleotide nucleotidyltransferase, putative; FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: mRNA catabolic process, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT3G03710.1); Has 30004 Blast hits to 26962 proteins in 2901 species: Archae - 317; Bacteria - 19794; Metazoa - 489; Fungi - 141; Plants - 452; Viruses - 0; Other Eukaryotes - 8811 (source: NCBI BLink). & (reliability: 1506.0) & (original description: no original description)","protein_coding" "LOC_Os02g40460","No alias","Oryza sativa","S1 RNA binding domain containing protein, expressed","protein_coding" "LOC_Os07g07310","No alias","Oryza sativa","polynucleotide phosphorylase, putative, expressed","protein_coding" "MA_10434926g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "Mp4g17520.1","No alias","Marchantia polymorpha","polynucleotide phosphorylase (PNP)","protein_coding" "Mp7g12350.1","No alias","Marchantia polymorpha","polynucleotide phosphorylase (PNP)","protein_coding" "Potri.001G347900","No alias","Populus trichocarpa","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "Potri.013G065700","No alias","Populus trichocarpa","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "Potri.019G040100","No alias","Populus trichocarpa","polyribonucleotide nucleotidyltransferase, putative","protein_coding" "Pp1s307_19V6","No alias","Physcomitrella patens","polyribonucleotide nucleotidyltransferase","protein_coding" "Pp1s336_43V6","No alias","Physcomitrella patens","polyribonucleotide nucleotidyltransferase","protein_coding" "Pp1s59_354V6","No alias","Physcomitrella patens","polyribonucleotide nucleotidyltransferase","protein_coding" "PSME_00007275-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "Seita.1G235700.1","No alias","Setaria italica ","phosphorolytic exoribonuclease *(PNP) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.2G044800.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group & phosphorolytic exoribonuclease *(PNP)","protein_coding" "Sobic.002G045700.1","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group & phosphorolytic exoribonuclease *(PNP)","protein_coding" "Sobic.004G215900.1","No alias","Sorghum bicolor ","phosphorolytic exoribonuclease *(PNP) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Solyc02g086600","No alias","Solanum lycopersicum","polyribonucleotide nucleotidyltransferase (AHRD V3.3 *** AT5G14580.1)","protein_coding" "Solyc08g066120","No alias","Solanum lycopersicum","polyribonucleotide nucleotidyltransferase (AHRD V3.3 *** AT3G03710.1)","protein_coding" "Solyc08g066140","No alias","Solanum lycopersicum","Polyribonucleotide nucleotidyltransferase (AHRD V3.3 *-* W9R4G3_9ROSA)","protein_coding" "Sopen02g031360","No alias","Solanum pennellii","3' exoribonuclease family, domain 1","protein_coding" "Sopen08g019820","No alias","Solanum pennellii","3' exoribonuclease family, domain 1","protein_coding"