Coexpression cluster: Cluster_288 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044424 intracellular part 18.75% (9/48) 2.17 0.000139 0.015901
GO:0006813 potassium ion transport 4.17% (2/48) 5.82 0.000581 0.016623
GO:0046907 intracellular transport 6.25% (3/48) 4.22 0.000565 0.018473
GO:0051649 establishment of localization in cell 6.25% (3/48) 4.22 0.000565 0.018473
GO:0015079 potassium ion transmembrane transporter activity 4.17% (2/48) 5.94 0.000491 0.022471
GO:0071805 potassium ion transmembrane transport 4.17% (2/48) 5.94 0.000491 0.022471
GO:0051641 cellular localization 6.25% (3/48) 3.93 0.001029 0.023572
GO:0005575 cellular_component 25.0% (12/48) 1.46 0.00094 0.023922
GO:0032991 protein-containing complex 14.58% (7/48) 2.62 0.000128 0.029226
GO:0030014 CCR4-NOT complex 2.08% (1/48) 9.46 0.001421 0.029577
GO:0044464 cell part 18.75% (9/48) 1.96 0.000415 0.031659
GO:0006302 double-strand break repair 2.08% (1/48) 7.14 0.007084 0.04269
GO:0004615 phosphomannomutase activity 2.08% (1/48) 7.14 0.007084 0.04269
GO:0009225 nucleotide-sugar metabolic process 2.08% (1/48) 7.14 0.007084 0.04269
GO:0019673 GDP-mannose metabolic process 2.08% (1/48) 7.14 0.007084 0.04269
GO:0008113 peptide-methionine (S)-S-oxide reductase activity 2.08% (1/48) 7.14 0.007084 0.04269
GO:0009298 GDP-mannose biosynthetic process 2.08% (1/48) 7.14 0.007084 0.04269
GO:0009226 nucleotide-sugar biosynthetic process 2.08% (1/48) 7.14 0.007084 0.04269
GO:0006473 protein acetylation 2.08% (1/48) 6.87 0.008495 0.044212
GO:0006475 internal protein amino acid acetylation 2.08% (1/48) 6.87 0.008495 0.044212
GO:0043543 protein acylation 2.08% (1/48) 6.87 0.008495 0.044212
GO:0016573 histone acetylation 2.08% (1/48) 6.87 0.008495 0.044212
GO:0018394 peptidyl-lysine acetylation 2.08% (1/48) 6.87 0.008495 0.044212
GO:0018393 internal peptidyl-lysine acetylation 2.08% (1/48) 6.87 0.008495 0.044212
GO:0006405 RNA export from nucleus 2.08% (1/48) 7.87 0.004256 0.044304
GO:0015931 nucleobase-containing compound transport 2.08% (1/48) 7.87 0.004256 0.044304
GO:0006406 mRNA export from nucleus 2.08% (1/48) 7.87 0.004256 0.044304
GO:0051168 nuclear export 2.08% (1/48) 7.87 0.004256 0.044304
GO:0051236 establishment of RNA localization 2.08% (1/48) 7.87 0.004256 0.044304
GO:0050657 nucleic acid transport 2.08% (1/48) 7.87 0.004256 0.044304
GO:0051028 mRNA transport 2.08% (1/48) 7.87 0.004256 0.044304
GO:0050658 RNA transport 2.08% (1/48) 7.87 0.004256 0.044304
GO:0051179 localization 12.5% (6/48) 1.85 0.006137 0.045337
GO:0098662 inorganic cation transmembrane transport 4.17% (2/48) 4.14 0.00582 0.045959
GO:0098660 inorganic ion transmembrane transport 4.17% (2/48) 4.14 0.00582 0.045959
GO:0098655 cation transmembrane transport 4.17% (2/48) 4.14 0.00582 0.045959
GO:0006310 DNA recombination 2.08% (1/48) 6.65 0.009904 0.046285
GO:0031248 protein acetyltransferase complex 2.08% (1/48) 6.65 0.009904 0.046285
GO:0000123 histone acetyltransferase complex 2.08% (1/48) 6.65 0.009904 0.046285
GO:0043248 proteasome assembly 2.08% (1/48) 6.65 0.009904 0.046285
GO:1902493 acetyltransferase complex 2.08% (1/48) 6.65 0.009904 0.046285
GO:0022607 cellular component assembly 4.17% (2/48) 4.1 0.006106 0.046607
GO:0006913 nucleocytoplasmic transport 2.08% (1/48) 6.46 0.011311 0.047094
GO:0051259 protein complex oligomerization 2.08% (1/48) 6.46 0.011311 0.047094
GO:0051169 nuclear transport 2.08% (1/48) 6.46 0.011311 0.047094
GO:0005198 structural molecule activity 6.25% (3/48) 2.72 0.01072 0.04721
GO:0016043 cellular component organization 6.25% (3/48) 2.68 0.011548 0.047222
GO:0034220 ion transmembrane transport 4.17% (2/48) 3.69 0.010562 0.047424
GO:0044428 nuclear part 4.17% (2/48) 3.7 0.010377 0.047527
GO:0043933 protein-containing complex subunit organization 4.17% (2/48) 4.25 0.005002 0.0498
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_128 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_183 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_283 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_43 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_124 0.026 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_195 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_207 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_231 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_255 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_297 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_390 0.028 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_25 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_92 0.028 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_222 0.022 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_161 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_211 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_214 0.027 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_264 0.03 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_43 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_75 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_168 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_249 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_247 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_98 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_221 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_263 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_268 0.032 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_346 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_423 0.033 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_486 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_495 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_502 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_530 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_1 0.036 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_75 0.028 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_110 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_120 0.027 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_133 0.029 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_143 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_179 0.022 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_212 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0079 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0095 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_48 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_319 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_343 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_371 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_374 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_375 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_382 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_4 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_69 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_84 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_183 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_224 0.028 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_43 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_55 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_27 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_56 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_22 0.021 Orthogroups_2024-Update Compare
Sequences (48) (download table)

InterPro Domains

GO Terms

Family Terms