Coexpression cluster: Cluster_177 (HCCA clusters)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140098 catalytic activity, acting on RNA 7.5% (6/80) 3.59 1.1e-05 0.003333
GO:0034641 cellular nitrogen compound metabolic process 13.75% (11/80) 2.04 7.1e-05 0.007155
GO:0016070 RNA metabolic process 8.75% (7/80) 2.87 5.1e-05 0.007662
GO:0034660 ncRNA metabolic process 5.0% (4/80) 3.86 0.000171 0.012925
GO:0006725 cellular aromatic compound metabolic process 10.0% (8/80) 2.03 0.000783 0.018244
GO:1901360 organic cyclic compound metabolic process 10.0% (8/80) 2.0 0.000885 0.01916
GO:0034062 5'-3' RNA polymerase activity 3.75% (3/80) 4.08 0.000764 0.019279
GO:0097747 RNA polymerase activity 3.75% (3/80) 4.08 0.000764 0.019279
GO:0046483 heterocycle metabolic process 10.0% (8/80) 2.04 0.000729 0.022102
GO:0090304 nucleic acid metabolic process 8.75% (7/80) 2.35 0.000447 0.022573
GO:0044271 cellular nitrogen compound biosynthetic process 8.75% (7/80) 2.32 0.000526 0.022751
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 3.75% (3/80) 4.18 0.000624 0.023643
GO:0034470 ncRNA processing 3.75% (3/80) 4.12 0.000706 0.023757
GO:0006139 nucleobase-containing compound metabolic process 10.0% (8/80) 2.16 0.000418 0.025322
GO:0034645 cellular macromolecule biosynthetic process 7.5% (6/80) 2.33 0.001279 0.025834
GO:0006364 rRNA processing 2.5% (2/80) 5.14 0.001477 0.026333
GO:0016072 rRNA metabolic process 2.5% (2/80) 5.14 0.001477 0.026333
GO:0009059 macromolecule biosynthetic process 7.5% (6/80) 2.25 0.001681 0.028293
GO:0003724 RNA helicase activity 1.25% (1/80) 8.72 0.002368 0.029895
GO:0008186 RNA-dependent ATPase activity 1.25% (1/80) 8.72 0.002368 0.029895
GO:0004004 ATP-dependent RNA helicase activity 1.25% (1/80) 8.72 0.002368 0.029895
GO:0030688 preribosome, small subunit precursor 1.25% (1/80) 8.72 0.002368 0.029895
GO:0034654 nucleobase-containing compound biosynthetic process 5.0% (4/80) 2.79 0.002732 0.033116
GO:0097659 nucleic acid-templated transcription 3.75% (3/80) 3.51 0.002359 0.035746
GO:0006351 transcription, DNA-templated 3.75% (3/80) 3.51 0.002359 0.035746
GO:0016779 nucleotidyltransferase activity 3.75% (3/80) 3.27 0.003765 0.043878
GO:0018130 heterocycle biosynthetic process 5.0% (4/80) 2.53 0.00523 0.048018
GO:0019438 aromatic compound biosynthetic process 5.0% (4/80) 2.53 0.00523 0.048018
GO:1901576 organic substance biosynthetic process 8.75% (7/80) 1.72 0.005421 0.048312
GO:0044249 cellular biosynthetic process 8.75% (7/80) 1.75 0.004805 0.048529
GO:0044464 cell part 12.5% (10/80) 1.38 0.004976 0.048638
GO:0050145 nucleoside monophosphate kinase activity 1.25% (1/80) 7.72 0.00473 0.049423
GO:0004017 adenylate kinase activity 1.25% (1/80) 7.72 0.00473 0.049423
GO:0032774 RNA biosynthetic process 3.75% (3/80) 3.19 0.004443 0.049865
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_148 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_267 0.023 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_297 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_138 0.032 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_181 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_199 0.028 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_200 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_246 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_283 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_360 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_365 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_34 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_186 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_229 0.022 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_20 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_79 0.024 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_189 0.021 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_217 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_7 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_184 0.021 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_16 0.021 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_40 0.022 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_62 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_133 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_49 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_66 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_81 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_74 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_84 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_99 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_107 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_161 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_165 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_189 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_221 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_304 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_315 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_321 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_391 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_414 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_463 0.025 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_123 0.023 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_136 0.022 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_56 0.022 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_146 0.022 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_192 0.031 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0048 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0083 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0088 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_98 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_144 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_202 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_208 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_210 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_216 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_235 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_254 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_260 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_278 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_55 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_296 0.028 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_297 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_171 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_259 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_7 0.026 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_106 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_124 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_154 0.029 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_250 0.027 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_288 0.024 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_11 0.02 Orthogroups_2024-Update Compare
Sequences (80) (download table)

InterPro Domains

GO Terms

Family Terms