Coexpression cluster: Cluster_84 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1990904 ribonucleoprotein complex 53.73% (36/67) 6.31 0.0 0.0
GO:0043043 peptide biosynthetic process 53.73% (36/67) 6.45 0.0 0.0
GO:0043226 organelle 53.73% (36/67) 5.08 0.0 0.0
GO:0043228 non-membrane-bounded organelle 53.73% (36/67) 6.33 0.0 0.0
GO:0043229 intracellular organelle 53.73% (36/67) 5.08 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 53.73% (36/67) 6.33 0.0 0.0
GO:0043604 amide biosynthetic process 53.73% (36/67) 6.41 0.0 0.0
GO:0044249 cellular biosynthetic process 58.21% (39/67) 5.08 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 55.22% (37/67) 5.55 0.0 0.0
GO:0044444 cytoplasmic part 53.73% (36/67) 5.56 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 56.72% (38/67) 5.79 0.0 0.0
GO:1901576 organic substance biosynthetic process 58.21% (39/67) 5.0 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 55.22% (37/67) 5.87 0.0 0.0
GO:0006518 peptide metabolic process 53.73% (36/67) 6.42 0.0 0.0
GO:0005840 ribosome 53.73% (36/67) 6.51 0.0 0.0
GO:0043603 cellular amide metabolic process 53.73% (36/67) 6.36 0.0 0.0
GO:0009058 biosynthetic process 58.21% (39/67) 4.83 0.0 0.0
GO:0009059 macromolecule biosynthetic process 55.22% (37/67) 5.77 0.0 0.0
GO:0005198 structural molecule activity 53.73% (36/67) 6.33 0.0 0.0
GO:0003735 structural constituent of ribosome 53.73% (36/67) 6.46 0.0 0.0
GO:0006412 translation 53.73% (36/67) 6.47 0.0 0.0
GO:0032991 protein-containing complex 53.73% (36/67) 4.88 0.0 0.0
GO:0005622 intracellular 35.82% (24/67) 6.48 0.0 0.0
GO:0044464 cell part 55.22% (37/67) 4.13 0.0 0.0
GO:0044424 intracellular part 53.73% (36/67) 4.2 0.0 0.0
GO:0044267 cellular protein metabolic process 53.73% (36/67) 3.9 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 56.72% (38/67) 3.39 0.0 0.0
GO:0019538 protein metabolic process 53.73% (36/67) 3.53 0.0 0.0
GO:0005575 cellular_component 55.22% (37/67) 3.15 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 58.21% (39/67) 2.56 0.0 0.0
GO:0044237 cellular metabolic process 59.7% (40/67) 2.06 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 55.22% (37/67) 2.19 0.0 0.0
GO:0006807 nitrogen compound metabolic process 58.21% (39/67) 2.04 0.0 0.0
GO:0043170 macromolecule metabolic process 56.72% (38/67) 2.06 0.0 0.0
GO:0009987 cellular process 59.7% (40/67) 1.92 0.0 0.0
GO:0071704 organic substance metabolic process 59.7% (40/67) 1.91 0.0 0.0
GO:0044238 primary metabolic process 58.21% (39/67) 1.9 0.0 0.0
GO:0008152 metabolic process 59.7% (40/67) 1.65 0.0 0.0
GO:0003674 molecular_function 68.66% (46/67) 1.16 0.0 0.0
GO:0008150 biological_process 59.7% (40/67) 1.26 0.0 0.0
GO:0003723 RNA binding 10.45% (7/67) 3.99 0.0 1e-06
GO:0019843 rRNA binding 4.48% (3/67) 6.52 5e-06 2.2e-05
GO:0008097 5S rRNA binding 2.99% (2/67) 8.39 1.3e-05 6e-05
GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity 1.49% (1/67) 9.39 0.00149 0.006705
GO:0006188 IMP biosynthetic process 1.49% (1/67) 8.39 0.002978 0.012818
GO:0046040 IMP metabolic process 1.49% (1/67) 8.39 0.002978 0.012818
GO:0010608 posttranscriptional regulation of gene expression 1.49% (1/67) 7.07 0.007429 0.024514
GO:0043243 positive regulation of protein complex disassembly 1.49% (1/67) 7.07 0.007429 0.024514
GO:0032270 positive regulation of cellular protein metabolic process 1.49% (1/67) 7.07 0.007429 0.024514
GO:0034248 regulation of cellular amide metabolic process 1.49% (1/67) 7.07 0.007429 0.024514
GO:0034250 positive regulation of cellular amide metabolic process 1.49% (1/67) 7.07 0.007429 0.024514
GO:0045727 positive regulation of translation 1.49% (1/67) 7.07 0.007429 0.024514
GO:0045901 positive regulation of translational elongation 1.49% (1/67) 7.07 0.007429 0.024514
GO:0045905 positive regulation of translational termination 1.49% (1/67) 7.07 0.007429 0.024514
GO:0051247 positive regulation of protein metabolic process 1.49% (1/67) 7.07 0.007429 0.024514
GO:0006449 regulation of translational termination 1.49% (1/67) 7.07 0.007429 0.024514
GO:0006448 regulation of translational elongation 1.49% (1/67) 7.07 0.007429 0.024514
GO:0006417 regulation of translation 1.49% (1/67) 7.07 0.007429 0.024514
GO:0006452 translational frameshifting 1.49% (1/67) 7.07 0.007429 0.024514
GO:0016842 amidine-lyase activity 1.49% (1/67) 7.39 0.005947 0.025054
GO:0000105 histidine biosynthetic process 1.49% (1/67) 6.81 0.008908 0.027996
GO:0006547 histidine metabolic process 1.49% (1/67) 6.81 0.008908 0.027996
GO:0052803 imidazole-containing compound metabolic process 1.49% (1/67) 6.81 0.008908 0.027996
GO:0043244 regulation of protein complex disassembly 1.49% (1/67) 6.39 0.01186 0.032614
GO:0051173 positive regulation of nitrogen compound metabolic process 1.49% (1/67) 6.39 0.01186 0.032614
GO:0031328 positive regulation of cellular biosynthetic process 1.49% (1/67) 6.39 0.01186 0.032614
GO:0031325 positive regulation of cellular metabolic process 1.49% (1/67) 6.39 0.01186 0.032614
GO:0010628 positive regulation of gene expression 1.49% (1/67) 6.39 0.01186 0.032614
GO:0009893 positive regulation of metabolic process 1.49% (1/67) 6.39 0.01186 0.032614
GO:0010604 positive regulation of macromolecule metabolic process 1.49% (1/67) 6.39 0.01186 0.032614
GO:0009891 positive regulation of biosynthetic process 1.49% (1/67) 6.39 0.01186 0.032614
GO:0010557 positive regulation of macromolecule biosynthetic process 1.49% (1/67) 6.39 0.01186 0.032614
GO:0051130 positive regulation of cellular component organization 1.49% (1/67) 5.93 0.016271 0.044133
GO:0016763 transferase activity, transferring pentosyl groups 1.49% (1/67) 5.81 0.017737 0.04621
GO:0006400 tRNA modification 1.49% (1/67) 5.81 0.017737 0.04621
GO:0043022 ribosome binding 1.49% (1/67) 5.81 0.017737 0.04621
GO:0006414 translational elongation 1.49% (1/67) 5.69 0.019201 0.048742
GO:0003746 translation elongation factor activity 1.49% (1/67) 5.69 0.019201 0.048742
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_26 0.056 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_55 0.225 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_102 0.21 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_113 0.043 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_279 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_293 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_58 0.268 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_226 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_231 0.051 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_1 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.036 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_25 0.038 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_56 0.027 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_57 0.019 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_61 0.045 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_66 0.029 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_70 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_89 0.028 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_99 0.038 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_106 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_112 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_122 0.029 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_186 0.058 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_19 0.069 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_58 0.263 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_77 0.021 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_168 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_24 0.239 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_47 0.026 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_1 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_20 0.041 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_90 0.021 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_111 0.112 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_166 0.061 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_169 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_7 0.078 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_13 0.16 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_36 0.024 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_52 0.027 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_64 0.061 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_87 0.223 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_130 0.118 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_135 0.031 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_147 0.061 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_210 0.029 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_218 0.03 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_298 0.124 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_25 0.37 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_75 0.021 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_23 0.143 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_54 0.056 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_87 0.059 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_26 0.064 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_45 0.071 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_117 0.066 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_133 0.025 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_235 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_254 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_53 0.029 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.229 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_132 0.096 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_188 0.027 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_202 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_49 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_76 0.31 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_93 0.04 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_110 0.073 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_129 0.052 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_158 0.072 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_192 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_212 0.056 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_221 0.029 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_249 0.039 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_290 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_300 0.056 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_334 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_391 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_421 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_426 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_438 0.046 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_440 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_472 0.03 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_489 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_29 0.15 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_72 0.025 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_144 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_150 0.028 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_161 0.022 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_21 0.15 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_112 0.037 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_35 0.138 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_130 0.05 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_143 0.055 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_174 0.021 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0043 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0072 0.038 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0075 0.027 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0084 0.035 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0021 0.084 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0027 0.074 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0028 0.076 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0033 0.028 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0055 0.038 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0071 0.051 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0098 0.027 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0117 0.061 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0132 0.028 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_8 0.138 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_10 0.281 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_24 0.039 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_75 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_91 0.135 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_102 0.04 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.132 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_167 0.188 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_212 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_254 0.143 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_354 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_40 0.097 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_61 0.061 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_145 0.163 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_168 0.047 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_246 0.04 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_249 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_296 0.035 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_24 0.294 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_75 0.07 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_80 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_87 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_124 0.238 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_296 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_37 0.164 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_75 0.069 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_85 0.219 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_138 0.026 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_143 0.03 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_265 0.145 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_5 0.045 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_31 0.089 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_61 0.119 Orthogroups_2024-Update Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms