Coexpression cluster: Cluster_26 (HCCA clusters)

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Average Expression Profile



Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006364 rRNA processing 5.61% (12/214) 5.57 0.0 0.0
GO:0016072 rRNA metabolic process 5.61% (12/214) 5.57 0.0 0.0
GO:0016070 RNA metabolic process 11.68% (25/214) 3.15 0.0 0.0
GO:0006396 RNA processing 8.41% (18/214) 3.75 0.0 0.0
GO:0034470 ncRNA processing 6.54% (14/214) 4.48 0.0 0.0
GO:0003676 nucleic acid binding 17.29% (37/214) 2.18 0.0 0.0
GO:0090304 nucleic acid metabolic process 11.68% (25/214) 2.57 0.0 0.0
GO:0034660 ncRNA metabolic process 6.54% (14/214) 3.69 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 13.08% (28/214) 2.05 0.0 0.0
GO:0005634 nucleus 6.07% (13/214) 3.27 0.0 0.0
GO:0046483 heterocycle metabolic process 13.08% (28/214) 1.93 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 13.08% (28/214) 1.93 0.0 0.0
GO:0005488 binding 33.18% (71/214) 1.01 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 13.08% (28/214) 1.9 0.0 0.0
GO:0043227 membrane-bounded organelle 6.07% (13/214) 2.94 0.0 0.0
GO:0043231 intracellular membrane-bounded organelle 6.07% (13/214) 2.94 0.0 0.0
GO:0030684 preribosome 2.34% (5/214) 5.7 0.0 0.0
GO:0097159 organic cyclic compound binding 22.9% (49/214) 1.19 0.0 0.0
GO:1901363 heterocyclic compound binding 22.9% (49/214) 1.19 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 13.08% (28/214) 1.66 0.0 1e-06
GO:0043229 intracellular organelle 7.48% (16/214) 2.26 0.0 3e-06
GO:0043226 organelle 7.48% (16/214) 2.26 0.0 3e-06
GO:0032040 small-subunit processome 1.87% (4/214) 5.79 0.0 4e-06
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.34% (5/214) 4.17 7e-06 8.3e-05
GO:0034062 5'-3' RNA polymerase activity 2.34% (5/214) 4.11 9e-06 9.6e-05
GO:0097747 RNA polymerase activity 2.34% (5/214) 4.11 9e-06 9.6e-05
GO:0005730 nucleolus 1.4% (3/214) 5.64 1.7e-05 0.000183
GO:0097659 nucleic acid-templated transcription 2.34% (5/214) 3.49 7.8e-05 0.000776
GO:0006351 transcription, DNA-templated 2.34% (5/214) 3.49 7.8e-05 0.000776
GO:0140098 catalytic activity, acting on RNA 3.74% (8/214) 2.49 9.2e-05 0.000893
GO:0016779 nucleotidyltransferase activity 2.8% (6/214) 2.98 0.00011 0.00103
GO:0003723 RNA binding 4.21% (9/214) 2.16 0.000197 0.001789
GO:0003674 molecular_function 39.25% (84/214) 0.49 0.00021 0.001848
GO:0022613 ribonucleoprotein complex biogenesis 1.4% (3/214) 4.5 0.000266 0.002203
GO:0042254 ribosome biogenesis 1.4% (3/214) 4.5 0.000266 0.002203
GO:0044428 nuclear part 2.34% (5/214) 3.08 0.000302 0.002432
GO:0008168 methyltransferase activity 3.27% (7/214) 2.44 0.000317 0.002483
GO:0044085 cellular component biogenesis 1.4% (3/214) 4.37 0.000351 0.002682
GO:0005515 protein binding 10.28% (22/214) 1.15 0.000416 0.003095
GO:0016741 transferase activity, transferring one-carbon groups 3.27% (7/214) 2.34 0.000491 0.003559
GO:0032774 RNA biosynthetic process 2.34% (5/214) 2.91 0.000519 0.003674
GO:0044464 cell part 8.88% (19/214) 1.18 0.000784 0.00541
GO:0044424 intracellular part 8.41% (18/214) 1.19 0.00098 0.00661
GO:0032553 ribonucleotide binding 11.21% (24/214) 0.95 0.001512 0.009968
GO:0097367 carbohydrate derivative binding 11.21% (24/214) 0.94 0.001655 0.010666
GO:1901265 nucleoside phosphate binding 11.68% (25/214) 0.88 0.002382 0.012793
GO:0000166 nucleotide binding 11.68% (25/214) 0.88 0.002382 0.012793
GO:0032550 purine ribonucleoside binding 2.8% (6/214) 2.16 0.002274 0.012933
GO:0005525 GTP binding 2.8% (6/214) 2.16 0.002274 0.012933
GO:0019001 guanyl nucleotide binding 2.8% (6/214) 2.16 0.002274 0.012933
GO:0032549 ribonucleoside binding 2.8% (6/214) 2.16 0.002274 0.012933
GO:0032561 guanyl ribonucleotide binding 2.8% (6/214) 2.16 0.002274 0.012933
GO:0001883 purine nucleoside binding 2.8% (6/214) 2.16 0.002274 0.012933
GO:0043168 anion binding 11.68% (25/214) 0.87 0.002497 0.013165
GO:0001882 nucleoside binding 2.8% (6/214) 2.15 0.00238 0.013271
GO:0035639 purine ribonucleoside triphosphate binding 10.75% (23/214) 0.92 0.0026 0.013466
GO:0032555 purine ribonucleotide binding 10.75% (23/214) 0.91 0.002732 0.013899
GO:0017076 purine nucleotide binding 10.75% (23/214) 0.91 0.002834 0.014171
GO:0036094 small molecule binding 11.68% (25/214) 0.81 0.00433 0.021285
GO:0043170 macromolecule metabolic process 13.08% (28/214) 0.71 0.00668 0.032285
GO:0016435 rRNA (guanine) methyltransferase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0008276 protein methyltransferase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0006166 purine ribonucleoside salvage 0.47% (1/214) 6.37 0.012063 0.034637
GO:0006190 inosine salvage 0.47% (1/214) 6.37 0.012063 0.034637
GO:0000154 rRNA modification 0.47% (1/214) 6.37 0.012063 0.034637
GO:0016279 protein-lysine N-methyltransferase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0042054 histone methyltransferase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0018024 histone-lysine N-methyltransferase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0070476 rRNA (guanine-N7)-methylation 0.47% (1/214) 6.37 0.012063 0.034637
GO:0090501 RNA phosphodiester bond hydrolysis 0.47% (1/214) 6.37 0.012063 0.034637
GO:0031167 rRNA methylation 0.47% (1/214) 6.37 0.012063 0.034637
GO:1904029 regulation of cyclin-dependent protein kinase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0090305 nucleic acid phosphodiester bond hydrolysis 0.47% (1/214) 6.37 0.012063 0.034637
GO:0045859 regulation of protein kinase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0043549 regulation of kinase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0042325 regulation of phosphorylation 0.47% (1/214) 6.37 0.012063 0.034637
GO:0000469 cleavage involved in rRNA processing 0.47% (1/214) 6.37 0.012063 0.034637
GO:0019901 protein kinase binding 0.47% (1/214) 6.37 0.012063 0.034637
GO:0019900 kinase binding 0.47% (1/214) 6.37 0.012063 0.034637
GO:0001932 regulation of protein phosphorylation 0.47% (1/214) 6.37 0.012063 0.034637
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0070475 rRNA base methylation 0.47% (1/214) 6.37 0.012063 0.034637
GO:0036265 RNA (guanine-N7)-methylation 0.47% (1/214) 6.37 0.012063 0.034637
GO:0051338 regulation of transferase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0044452 nucleolar part 0.47% (1/214) 6.37 0.012063 0.034637
GO:0071900 regulation of protein serine/threonine kinase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0046103 inosine biosynthetic process 0.47% (1/214) 6.37 0.012063 0.034637
GO:0043174 nucleoside salvage 0.47% (1/214) 6.37 0.012063 0.034637
GO:0016278 lysine N-methyltransferase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0034457 Mpp10 complex 0.47% (1/214) 6.37 0.012063 0.034637
GO:0043094 cellular metabolic compound salvage 0.47% (1/214) 6.37 0.012063 0.034637
GO:0046102 inosine metabolic process 0.47% (1/214) 6.37 0.012063 0.034637
GO:0003724 RNA helicase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0004004 ATP-dependent RNA helicase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0043101 purine-containing compound salvage 0.47% (1/214) 6.37 0.012063 0.034637
GO:0008186 RNA-dependent ATPase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:0005732 small nucleolar ribonucleoprotein complex 0.47% (1/214) 6.37 0.012063 0.034637
GO:0050483 IMP 5'-nucleotidase activity 0.47% (1/214) 6.37 0.012063 0.034637
GO:1990904 ribonucleoprotein complex 2.8% (6/214) 1.81 0.007568 0.035979
GO:0043167 ion binding 13.08% (28/214) 0.63 0.013785 0.039194
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 0.93% (2/214) 3.79 0.008828 0.041292
GO:0006807 nitrogen compound metabolic process 14.49% (31/214) 0.58 0.015603 0.04393
GO:0009116 nucleoside metabolic process 0.93% (2/214) 3.29 0.017486 0.048295
GO:1901657 glycosyl compound metabolic process 0.93% (2/214) 3.29 0.017486 0.048295
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_19 0.026 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_26 0.114 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_96 0.037 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_29 0.095 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_96 0.03 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_122 0.024 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_147 0.031 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_175 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_199 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_6 0.077 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_61 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_66 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_72 0.051 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_108 0.025 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_13 0.083 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_35 0.034 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_69 0.034 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_114 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_82 0.054 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_151 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_184 0.024 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_225 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_249 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_292 0.025 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_1 0.023 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_8 0.045 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_19 0.072 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_45 0.06 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_47 0.037 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_18 0.041 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_116 0.021 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_147 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_59 0.127 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_226 0.026 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_243 0.042 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_109 0.056 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_170 0.047 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_289 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_311 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_385 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_420 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_438 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_444 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_459 0.029 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_48 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_100 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_160 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_13 0.094 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_32 0.026 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_47 0.037 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_59 0.021 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_108 0.086 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_145 0.061 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_73 0.071 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_115 0.025 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0017 0.028 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0059 0.041 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0079 0.031 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0009 0.058 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0028 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0071 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0096 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0097 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0106 0.032 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0118 0.027 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0132 0.031 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_8 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_24 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_32 0.052 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_58 0.047 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.04 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_181 0.071 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_197 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_264 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_326 0.036 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_28 0.072 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_40 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_117 0.031 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_43 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_46 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_66 0.091 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_75 0.035 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_164 0.064 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_216 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_37 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_45 0.104 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_56 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_75 0.058 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_108 0.036 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_138 0.026 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_201 0.041 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_11 0.068 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_17 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_114 0.032 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_137 0.022 Orthogroups_2024-Update Compare
Sequences (214) (download table)



InterPro Domains



GO Terms



Family Terms