Coexpression cluster: Cluster_13 (HCCA clusters)

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Average Expression Profile



Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044436 thylakoid part 10.74% (16/149) 5.9 0.0 0.0
GO:0009521 photosystem 10.07% (15/149) 6.0 0.0 0.0
GO:0015979 photosynthesis 10.07% (15/149) 5.9 0.0 0.0
GO:0009522 photosystem I 6.04% (9/149) 6.9 0.0 0.0
GO:0098796 membrane protein complex 11.41% (17/149) 4.43 0.0 0.0
GO:0009538 photosystem I reaction center 3.36% (5/149) 6.9 0.0 0.0
GO:0044425 membrane part 13.42% (20/149) 2.61 0.0 0.0
GO:0009523 photosystem II 4.03% (6/149) 5.23 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 3.36% (5/149) 5.13 0.0 5e-06
GO:0032991 protein-containing complex 11.41% (17/149) 2.07 1e-06 1.3e-05
GO:1990204 oxidoreductase complex 3.36% (5/149) 4.76 1e-06 1.7e-05
GO:0044424 intracellular part 12.75% (19/149) 1.79 2e-06 4.2e-05
GO:0044464 cell part 12.75% (19/149) 1.7 6e-06 9.5e-05
GO:0005575 cellular_component 17.45% (26/149) 1.2 5.1e-05 0.000761
GO:0019898 extrinsic component of membrane 2.01% (3/149) 4.67 0.000197 0.002752
GO:0015079 potassium ion transmembrane transporter activity 1.34% (2/149) 5.57 0.000689 0.008473
GO:0071805 potassium ion transmembrane transport 1.34% (2/149) 5.57 0.000689 0.008473
GO:1902494 catalytic complex 3.36% (5/149) 2.77 0.00083 0.009643
GO:0018208 peptidyl-proline modification 2.01% (3/149) 3.62 0.001808 0.018891
GO:0000413 protein peptidyl-prolyl isomerization 2.01% (3/149) 3.62 0.001808 0.018891
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.01% (3/149) 3.57 0.001996 0.018966
GO:0016859 cis-trans isomerase activity 2.01% (3/149) 3.57 0.001996 0.018966
GO:0043169 cation binding 6.71% (10/149) 1.55 0.002337 0.021235
GO:0016853 isomerase activity 2.68% (4/149) 2.57 0.004612 0.040164
GO:0018193 peptidyl-amino acid modification 2.01% (3/149) 3.12 0.004901 0.040969
GO:0006813 potassium ion transport 1.34% (2/149) 4.2 0.005144 0.041348
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_11 0.032 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_95 0.048 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_18 0.029 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_160 0.039 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_315 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_16 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_18 0.063 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_56 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_65 0.022 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_15 0.023 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_20 0.053 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_61 0.031 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_110 0.024 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_1 0.031 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_23 0.029 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_135 0.027 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_5 0.104 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_63 0.035 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_101 0.049 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_113 0.022 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_69 0.021 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_8 0.028 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_67 0.025 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_120 0.032 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_79 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_88 0.043 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_202 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_5 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_63 0.049 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_178 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_389 0.037 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_43 0.032 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_86 0.024 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_107 0.029 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0010 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0050 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_9 0.058 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_84 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_27 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_101 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_152 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_14 0.026 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_148 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_225 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_237 0.046 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_35 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_43 0.065 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_19 0.053 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_89 0.021 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_91 0.032 Orthogroups_2024-Update Compare
Sequences (149) (download table)



InterPro Domains



GO Terms



Family Terms