Coexpression cluster: Cluster_149 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005622 intracellular 10.0% (5/50) 4.29 6e-06 0.001168
GO:1901566 organonitrogen compound biosynthetic process 12.0% (6/50) 3.07 7.4e-05 0.007747
GO:0006813 potassium ion transport 4.0% (2/50) 5.77 0.000595 0.009525
GO:0043228 non-membrane-bounded organelle 8.0% (4/50) 3.38 0.000579 0.010037
GO:0043232 intracellular non-membrane-bounded organelle 8.0% (4/50) 3.38 0.000579 0.010037
GO:1990904 ribonucleoprotein complex 8.0% (4/50) 3.32 0.000681 0.010118
GO:0043603 cellular amide metabolic process 8.0% (4/50) 3.39 0.000563 0.011714
GO:0005198 structural molecule activity 8.0% (4/50) 3.42 0.000532 0.012304
GO:0015103 inorganic anion transmembrane transporter activity 4.0% (2/50) 5.47 0.000911 0.012632
GO:0043604 amide biosynthetic process 8.0% (4/50) 3.44 0.000503 0.013073
GO:0006518 peptide metabolic process 8.0% (4/50) 3.48 0.000447 0.013287
GO:0043043 peptide biosynthetic process 8.0% (4/50) 3.52 0.000408 0.014159
GO:0003735 structural constituent of ribosome 8.0% (4/50) 3.55 0.000372 0.015482
GO:0008509 anion transmembrane transporter activity 4.0% (2/50) 5.15 0.001432 0.017521
GO:0015075 ion transmembrane transporter activity 8.0% (4/50) 3.05 0.001359 0.017665
GO:0006412 translation 8.0% (4/50) 3.58 0.000349 0.018164
GO:0006520 cellular amino acid metabolic process 6.0% (3/50) 3.66 0.00171 0.019756
GO:0015698 inorganic anion transport 4.0% (2/50) 4.61 0.003011 0.022366
GO:0044249 cellular biosynthetic process 12.0% (6/50) 2.07 0.002923 0.022522
GO:0005840 ribosome 8.0% (4/50) 3.6 0.000327 0.022705
GO:0034645 cellular macromolecule biosynthetic process 8.0% (4/50) 2.89 0.002076 0.022729
GO:0009059 macromolecule biosynthetic process 8.0% (4/50) 2.76 0.002871 0.022968
GO:0004055 argininosuccinate synthase activity 2.0% (1/50) 8.47 0.002818 0.02345
GO:0015703 chromate transport 2.0% (1/50) 8.47 0.002818 0.02345
GO:0006808 regulation of nitrogen utilization 2.0% (1/50) 8.47 0.002818 0.02345
GO:0015109 chromate transmembrane transporter activity 2.0% (1/50) 8.47 0.002818 0.02345
GO:1901576 organic substance biosynthetic process 12.0% (6/50) 2.01 0.003503 0.024291
GO:0008652 cellular amino acid biosynthetic process 4.0% (2/50) 4.47 0.003658 0.024547
GO:1901605 alpha-amino acid metabolic process 4.0% (2/50) 4.52 0.003436 0.024644
GO:1901607 alpha-amino acid biosynthetic process 4.0% (2/50) 4.77 0.002423 0.025201
GO:0006820 anion transport 4.0% (2/50) 4.43 0.003888 0.025269
GO:0006811 ion transport 8.0% (4/50) 2.8 0.002586 0.025616
GO:0044444 cytoplasmic part 8.0% (4/50) 2.58 0.004487 0.028281
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 2.0% (1/50) 7.47 0.005629 0.031645
GO:0006525 arginine metabolic process 2.0% (1/50) 7.47 0.005629 0.031645
GO:0006526 arginine biosynthetic process 2.0% (1/50) 7.47 0.005629 0.031645
GO:0009058 biosynthetic process 12.0% (6/50) 1.9 0.005217 0.031917
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 2.0% (1/50) 6.89 0.008432 0.033729
GO:0016972 thiol oxidase activity 2.0% (1/50) 6.89 0.008432 0.033729
GO:0046451 diaminopimelate metabolic process 2.0% (1/50) 6.89 0.008432 0.033729
GO:0009085 lysine biosynthetic process 2.0% (1/50) 6.89 0.008432 0.033729
GO:0009089 lysine biosynthetic process via diaminopimelate 2.0% (1/50) 6.89 0.008432 0.033729
GO:0006553 lysine metabolic process 2.0% (1/50) 6.89 0.008432 0.033729
GO:0005215 transporter activity 8.0% (4/50) 2.3 0.008721 0.034226
GO:0015672 monovalent inorganic cation transport 4.0% (2/50) 4.01 0.006829 0.034645
GO:0006082 organic acid metabolic process 6.0% (3/50) 2.96 0.006776 0.035237
GO:0043436 oxoacid metabolic process 6.0% (3/50) 2.96 0.006776 0.035237
GO:0043226 organelle 8.0% (4/50) 2.36 0.007627 0.035253
GO:0019752 carboxylic acid metabolic process 6.0% (3/50) 2.98 0.006507 0.035619
GO:0008150 biological_process 34.0% (17/50) 0.86 0.00754 0.035643
GO:0043229 intracellular organelle 8.0% (4/50) 2.36 0.007532 0.036434
GO:0022857 transmembrane transporter activity 8.0% (4/50) 2.37 0.007438 0.036837
GO:1901564 organonitrogen compound metabolic process 18.0% (9/50) 1.33 0.008179 0.036985
GO:0030001 metal ion transport 4.0% (2/50) 3.64 0.011256 0.040368
GO:0008272 sulfate transport 2.0% (1/50) 6.47 0.011227 0.04097
GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor 2.0% (1/50) 6.47 0.011227 0.04097
GO:0072348 sulfur compound transport 2.0% (1/50) 6.47 0.011227 0.04097
GO:0015116 sulfate transmembrane transporter activity 2.0% (1/50) 6.47 0.011227 0.04097
GO:0043648 dicarboxylic acid metabolic process 2.0% (1/50) 6.15 0.014015 0.046271
GO:0010207 photosystem II assembly 2.0% (1/50) 6.15 0.014015 0.046271
GO:1901682 sulfur compound transmembrane transporter activity 2.0% (1/50) 6.15 0.014015 0.046271
GO:0016053 organic acid biosynthetic process 4.0% (2/50) 3.49 0.013628 0.047242
GO:0046394 carboxylic acid biosynthetic process 4.0% (2/50) 3.49 0.013628 0.047242
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum pennellii HCCA clusters Cluster_76 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_40 0.022 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_14 0.021 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_161 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_233 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_236 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_444 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_165 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_37 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_254 0.02 Orthogroups_2024-Update Compare
Sequences (50) (download table)

InterPro Domains

GO Terms

Family Terms