Coexpression cluster: Cluster_70 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044436 thylakoid part 8.62% (5/58) 5.58 0.0 1.5e-05
GO:0016491 oxidoreductase activity 15.52% (9/58) 2.61 1.4e-05 0.001199
GO:0009512 cytochrome b6f complex 3.45% (2/58) 8.26 1.1e-05 0.001308
GO:0070069 cytochrome complex 3.45% (2/58) 7.26 6.3e-05 0.003907
GO:0046834 lipid phosphorylation 3.45% (2/58) 6.67 0.000156 0.006485
GO:0046854 phosphatidylinositol phosphorylation 3.45% (2/58) 6.67 0.000156 0.006485
GO:0009654 photosystem II oxygen evolving complex 3.45% (2/58) 5.17 0.001384 0.012767
GO:0009135 purine nucleoside diphosphate metabolic process 3.45% (2/58) 5.17 0.001384 0.012767
GO:0046031 ADP metabolic process 3.45% (2/58) 5.17 0.001384 0.012767
GO:0046939 nucleotide phosphorylation 3.45% (2/58) 5.17 0.001384 0.012767
GO:0006757 ATP generation from ADP 3.45% (2/58) 5.17 0.001384 0.012767
GO:0009132 nucleoside diphosphate metabolic process 3.45% (2/58) 5.17 0.001384 0.012767
GO:0006096 glycolytic process 3.45% (2/58) 5.17 0.001384 0.012767
GO:0009185 ribonucleoside diphosphate metabolic process 3.45% (2/58) 5.17 0.001384 0.012767
GO:0009179 purine ribonucleoside diphosphate metabolic process 3.45% (2/58) 5.17 0.001384 0.012767
GO:0006165 nucleoside diphosphate phosphorylation 3.45% (2/58) 5.17 0.001384 0.012767
GO:0042866 pyruvate biosynthetic process 3.45% (2/58) 5.17 0.001384 0.012767
GO:0006090 pyruvate metabolic process 3.45% (2/58) 5.09 0.001554 0.013821
GO:0009523 photosystem II 3.45% (2/58) 5.01 0.001733 0.014387
GO:0065008 regulation of biological quality 5.17% (3/58) 3.67 0.001686 0.014472
GO:0009142 nucleoside triphosphate biosynthetic process 3.45% (2/58) 4.5 0.003499 0.016438
GO:0009145 purine nucleoside triphosphate biosynthetic process 3.45% (2/58) 4.5 0.003499 0.016438
GO:0009201 ribonucleoside triphosphate biosynthetic process 3.45% (2/58) 4.5 0.003499 0.016438
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 3.45% (2/58) 4.5 0.003499 0.016438
GO:0006754 ATP biosynthetic process 3.45% (2/58) 4.5 0.003499 0.016438
GO:0016052 carbohydrate catabolic process 3.45% (2/58) 4.8 0.002327 0.016554
GO:0019363 pyridine nucleotide biosynthetic process 3.45% (2/58) 4.8 0.002327 0.016554
GO:0019359 nicotinamide nucleotide biosynthetic process 3.45% (2/58) 4.8 0.002327 0.016554
GO:1990204 oxidoreductase complex 3.45% (2/58) 4.8 0.002327 0.016554
GO:0072525 pyridine-containing compound biosynthetic process 3.45% (2/58) 4.73 0.002543 0.016664
GO:0019362 pyridine nucleotide metabolic process 3.45% (2/58) 4.73 0.002543 0.016664
GO:0046496 nicotinamide nucleotide metabolic process 3.45% (2/58) 4.73 0.002543 0.016664
GO:0055114 oxidation-reduction process 12.07% (7/58) 2.32 0.000471 0.016765
GO:1901292 nucleoside phosphate catabolic process 3.45% (2/58) 4.67 0.002769 0.016814
GO:0072524 pyridine-containing compound metabolic process 3.45% (2/58) 4.67 0.002769 0.016814
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 3.45% (2/58) 4.26 0.004893 0.01692
GO:0019439 aromatic compound catabolic process 3.45% (2/58) 4.26 0.004893 0.01692
GO:0009156 ribonucleoside monophosphate biosynthetic process 3.45% (2/58) 4.26 0.004893 0.01692
GO:0072330 monocarboxylic acid biosynthetic process 3.45% (2/58) 4.26 0.004893 0.01692
GO:1901361 organic cyclic compound catabolic process 3.45% (2/58) 4.26 0.004893 0.01692
GO:0009124 nucleoside monophosphate biosynthetic process 3.45% (2/58) 4.26 0.004893 0.01692
GO:0009127 purine nucleoside monophosphate biosynthetic process 3.45% (2/58) 4.26 0.004893 0.01692
GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor 1.72% (1/58) 8.26 0.003269 0.01696
GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity 1.72% (1/58) 8.26 0.003269 0.01696
GO:0009496 plastoquinol--plastocyanin reductase activity 1.72% (1/58) 8.26 0.003269 0.01696
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors 3.45% (2/58) 4.61 0.003003 0.016994
GO:0006091 generation of precursor metabolites and energy 3.45% (2/58) 4.61 0.003003 0.016994
GO:0006733 oxidoreduction coenzyme metabolic process 3.45% (2/58) 4.61 0.003003 0.016994
GO:0006644 phospholipid metabolic process 3.45% (2/58) 4.45 0.00376 0.017022
GO:0009521 photosystem 3.45% (2/58) 4.45 0.00376 0.017022
GO:0009166 nucleotide catabolic process 3.45% (2/58) 4.86 0.00212 0.017026
GO:0003824 catalytic activity 31.03% (18/58) 0.98 0.00271 0.0173
GO:0009055 electron transfer activity 3.45% (2/58) 4.21 0.005197 0.017728
GO:0009144 purine nucleoside triphosphate metabolic process 3.45% (2/58) 4.3 0.004596 0.017883
GO:0034655 nucleobase-containing compound catabolic process 3.45% (2/58) 4.3 0.004596 0.017883
GO:0009199 ribonucleoside triphosphate metabolic process 3.45% (2/58) 4.3 0.004596 0.017883
GO:0044270 cellular nitrogen compound catabolic process 3.45% (2/58) 4.3 0.004596 0.017883
GO:0009205 purine ribonucleoside triphosphate metabolic process 3.45% (2/58) 4.3 0.004596 0.017883
GO:0046700 heterocycle catabolic process 3.45% (2/58) 4.3 0.004596 0.017883
GO:0046434 organophosphate catabolic process 3.45% (2/58) 4.3 0.004596 0.017883
GO:0034404 nucleobase-containing small molecule biosynthetic process 3.45% (2/58) 4.56 0.003246 0.017963
GO:0019725 cellular homeostasis 5.17% (3/58) 4.09 0.000731 0.018197
GO:0008152 metabolic process 27.59% (16/58) 0.98 0.004784 0.018326
GO:0004618 phosphoglycerate kinase activity 1.72% (1/58) 7.26 0.006528 0.018472
GO:0017004 cytochrome complex assembly 1.72% (1/58) 7.26 0.006528 0.018472
GO:0034357 photosynthetic membrane 1.72% (1/58) 7.26 0.006528 0.018472
GO:0005261 cation channel activity 1.72% (1/58) 7.26 0.006528 0.018472
GO:0070567 cytidylyltransferase activity 1.72% (1/58) 7.26 0.006528 0.018472
GO:0042651 thylakoid membrane 1.72% (1/58) 7.26 0.006528 0.018472
GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes 1.72% (1/58) 7.26 0.006528 0.018472
GO:0051002 ligase activity, forming nitrogen-metal bonds 1.72% (1/58) 7.26 0.006528 0.018472
GO:0016851 magnesium chelatase activity 1.72% (1/58) 7.26 0.006528 0.018472
GO:0019637 organophosphate metabolic process 6.9% (4/58) 2.47 0.00588 0.018532
GO:0009141 nucleoside triphosphate metabolic process 3.45% (2/58) 4.17 0.005511 0.018543
GO:0009126 purine nucleoside monophosphate metabolic process 3.45% (2/58) 4.13 0.005832 0.018619
GO:0009161 ribonucleoside monophosphate metabolic process 3.45% (2/58) 4.13 0.005832 0.018619
GO:0009167 purine ribonucleoside monophosphate metabolic process 3.45% (2/58) 4.13 0.005832 0.018619
GO:0009123 nucleoside monophosphate metabolic process 3.45% (2/58) 4.13 0.005832 0.018619
GO:0030258 lipid modification 3.45% (2/58) 5.67 0.000679 0.018784
GO:0046034 ATP metabolic process 3.45% (2/58) 4.35 0.004309 0.018823
GO:0015979 photosynthesis 3.45% (2/58) 4.35 0.004309 0.018823
GO:0009108 coenzyme biosynthetic process 3.45% (2/58) 3.97 0.007203 0.020152
GO:0008150 biological_process 36.21% (21/58) 0.95 0.001304 0.02029
GO:0046486 glycerolipid metabolic process 3.45% (2/58) 5.26 0.001224 0.02032
GO:0006650 glycerophospholipid metabolic process 3.45% (2/58) 5.26 0.001224 0.02032
GO:0045454 cell redox homeostasis 5.17% (3/58) 4.14 0.000654 0.020361
GO:0019898 extrinsic component of membrane 3.45% (2/58) 5.45 0.000932 0.021101
GO:0009260 ribonucleotide biosynthetic process 3.45% (2/58) 3.9 0.007938 0.021484
GO:0046390 ribose phosphate biosynthetic process 3.45% (2/58) 3.9 0.007938 0.021484
GO:0009152 purine ribonucleotide biosynthetic process 3.45% (2/58) 3.9 0.007938 0.021484
GO:0042592 homeostatic process 5.17% (3/58) 3.86 0.001146 0.021948
GO:0006732 coenzyme metabolic process 3.45% (2/58) 3.86 0.008317 0.022269
GO:0046488 phosphatidylinositol metabolic process 3.45% (2/58) 5.35 0.001073 0.022271
GO:0032787 monocarboxylic acid metabolic process 3.45% (2/58) 3.83 0.008705 0.022816
GO:0006164 purine nucleotide biosynthetic process 3.45% (2/58) 3.83 0.008705 0.022816
GO:0072522 purine-containing compound biosynthetic process 3.45% (2/58) 3.73 0.009915 0.025717
GO:0009259 ribonucleotide metabolic process 3.45% (2/58) 3.67 0.010761 0.027342
GO:0009150 purine ribonucleotide metabolic process 3.45% (2/58) 3.67 0.010761 0.027342
GO:0006163 purine nucleotide metabolic process 3.45% (2/58) 3.61 0.011638 0.029271
GO:0019693 ribose phosphate metabolic process 3.45% (2/58) 3.58 0.012087 0.030098
GO:0004427 inorganic diphosphatase activity 1.72% (1/58) 6.26 0.013015 0.031161
GO:0004332 fructose-bisphosphate aldolase activity 1.72% (1/58) 6.26 0.013015 0.031161
GO:0016774 phosphotransferase activity, carboxyl group as acceptor 1.72% (1/58) 6.26 0.013015 0.031161
GO:0051188 cofactor biosynthetic process 3.45% (2/58) 3.5 0.013482 0.031971
GO:0072521 purine-containing compound metabolic process 3.45% (2/58) 3.53 0.01301 0.032073
GO:1901137 carbohydrate derivative biosynthetic process 3.45% (2/58) 3.48 0.013961 0.032796
GO:0016832 aldehyde-lyase activity 1.72% (1/58) 5.93 0.016242 0.037448
GO:0008113 peptide-methionine (S)-S-oxide reductase activity 1.72% (1/58) 5.93 0.016242 0.037448
GO:0017144 drug metabolic process 3.45% (2/58) 3.35 0.016469 0.037621
GO:0044255 cellular lipid metabolic process 3.45% (2/58) 3.3 0.017522 0.039663
GO:0046394 carboxylic acid biosynthetic process 3.45% (2/58) 3.28 0.018059 0.040148
GO:0016053 organic acid biosynthetic process 3.45% (2/58) 3.28 0.018059 0.040148
GO:0044248 cellular catabolic process 3.45% (2/58) 3.26 0.018602 0.040991
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 1.72% (1/58) 5.67 0.01946 0.041771
GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors 1.72% (1/58) 5.67 0.01946 0.041771
GO:0044424 intracellular part 10.34% (6/58) 1.49 0.019444 0.04247
GO:0051186 cofactor metabolic process 3.45% (2/58) 3.17 0.020846 0.044365
GO:1901575 organic substance catabolic process 3.45% (2/58) 3.09 0.023197 0.048949
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_11 0.026 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_12 0.038 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_36 0.031 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_178 0.026 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_264 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_3 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_163 0.041 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_252 0.036 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_297 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_332 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_106 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_118 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_160 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_20 0.035 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_27 0.047 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_41 0.027 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_61 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_134 0.029 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_23 0.046 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_135 0.04 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_15 0.036 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_63 0.033 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_67 0.041 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_101 0.064 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_118 0.032 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_164 0.038 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_199 0.026 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_298 0.02 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_5 0.021 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_11 0.03 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_30 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_7 0.022 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_47 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_234 0.026 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_41 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_121 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_24 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_44 0.035 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_48 0.048 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_89 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_178 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_199 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_254 0.075 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_313 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_30 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_119 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_60 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_68 0.025 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_86 0.068 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_110 0.024 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0010 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0018 0.034 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0030 0.039 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0072 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_50 0.028 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_137 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_59 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_101 0.061 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_23 0.084 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_237 0.034 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_43 0.058 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_110 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_118 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_130 0.03 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_163 0.034 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_172 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_218 0.026 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_15 0.026 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_23 0.027 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_51 0.051 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_63 0.033 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_97 0.023 Orthogroups_2024-Update Compare
Sequences (58) (download table)

InterPro Domains

GO Terms

Family Terms