Coexpression cluster: Cluster_56 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006793 phosphorus metabolic process 17.37% (33/190) 1.88 0.0 0.0
GO:0006796 phosphate-containing compound metabolic process 17.37% (33/190) 1.88 0.0 0.0
GO:0007165 signal transduction 7.37% (14/190) 2.89 0.0 0.0
GO:0009987 cellular process 24.74% (47/190) 1.11 0.0 1.3e-05
GO:0050794 regulation of cellular process 8.95% (17/190) 2.12 0.0 1.4e-05
GO:0006468 protein phosphorylation 11.58% (22/190) 1.81 0.0 1.4e-05
GO:0016849 phosphorus-oxygen lyase activity 5.26% (10/190) 2.95 1e-06 1.4e-05
GO:0016310 phosphorylation 11.58% (22/190) 1.74 1e-06 1.5e-05
GO:0009187 cyclic nucleotide metabolic process 5.26% (10/190) 2.96 1e-06 1.5e-05
GO:0009190 cyclic nucleotide biosynthetic process 5.26% (10/190) 2.96 1e-06 1.5e-05
GO:0004672 protein kinase activity 11.58% (22/190) 1.79 0.0 1.5e-05
GO:0016772 transferase activity, transferring phosphorus-containing groups 12.63% (24/190) 1.63 1e-06 1.6e-05
GO:0050789 regulation of biological process 8.95% (17/190) 2.09 1e-06 1.6e-05
GO:0065007 biological regulation 8.95% (17/190) 2.02 1e-06 1.6e-05
GO:0016773 phosphotransferase activity, alcohol group as acceptor 11.58% (22/190) 1.71 1e-06 1.7e-05
GO:0016301 kinase activity 11.58% (22/190) 1.69 1e-06 1.9e-05
GO:0006807 nitrogen compound metabolic process 21.05% (40/190) 1.12 2e-06 2.6e-05
GO:0035556 intracellular signal transduction 5.26% (10/190) 2.77 2e-06 2.8e-05
GO:0006464 cellular protein modification process 12.63% (24/190) 1.55 2e-06 2.8e-05
GO:0036211 protein modification process 12.63% (24/190) 1.55 2e-06 2.8e-05
GO:0044237 cellular metabolic process 21.05% (40/190) 1.09 3e-06 3.6e-05
GO:0043412 macromolecule modification 12.63% (24/190) 1.47 6e-06 6e-05
GO:0034654 nucleobase-containing compound biosynthetic process 6.32% (12/190) 2.3 7e-06 6.4e-05
GO:1901293 nucleoside phosphate biosynthetic process 5.26% (10/190) 2.51 1.1e-05 9.9e-05
GO:0009165 nucleotide biosynthetic process 5.26% (10/190) 2.51 1.1e-05 9.9e-05
GO:0016829 lyase activity 5.26% (10/190) 2.42 1.8e-05 0.000159
GO:0009117 nucleotide metabolic process 5.26% (10/190) 2.4 2.1e-05 0.000178
GO:0006753 nucleoside phosphate metabolic process 5.26% (10/190) 2.37 2.5e-05 0.000198
GO:0044267 cellular protein metabolic process 12.63% (24/190) 1.34 2.8e-05 0.000219
GO:0019438 aromatic compound biosynthetic process 6.32% (12/190) 2.06 3.3e-05 0.000247
GO:0140096 catalytic activity, acting on a protein 12.63% (24/190) 1.32 3.5e-05 0.000249
GO:0090407 organophosphate biosynthetic process 5.26% (10/190) 2.31 3.6e-05 0.000252
GO:0016740 transferase activity 14.21% (27/190) 1.21 3.7e-05 0.000254
GO:0018130 heterocycle biosynthetic process 6.32% (12/190) 2.03 4.3e-05 0.00028
GO:0071704 organic substance metabolic process 21.05% (40/190) 0.92 4.7e-05 0.000285
GO:0044238 primary metabolic process 20.53% (39/190) 0.94 4.5e-05 0.000287
GO:0055086 nucleobase-containing small molecule metabolic process 5.26% (10/190) 2.27 4.7e-05 0.000292
GO:1901362 organic cyclic compound biosynthetic process 6.32% (12/190) 1.97 6.2e-05 0.000366
GO:0019637 organophosphate metabolic process 5.26% (10/190) 2.08 0.000139 0.000797
GO:0044260 cellular macromolecule metabolic process 13.16% (25/190) 1.11 0.00023 0.001288
GO:0051260 protein homooligomerization 1.05% (2/190) 5.96 0.00034 0.001857
GO:0044271 cellular nitrogen compound biosynthetic process 6.84% (13/190) 1.61 0.000362 0.00193
GO:0019538 protein metabolic process 12.63% (24/190) 1.09 0.000388 0.002021
GO:0043170 macromolecule metabolic process 15.26% (29/190) 0.93 0.000553 0.002818
GO:0003674 molecular_function 38.95% (74/190) 0.48 0.000631 0.00314
GO:0008150 biological_process 28.42% (54/190) 0.6 0.000724 0.003525
GO:0006139 nucleobase-containing compound metabolic process 7.89% (15/190) 1.33 0.001034 0.004927
GO:0051259 protein complex oligomerization 1.05% (2/190) 5.22 0.001117 0.005213
GO:0044281 small molecule metabolic process 5.79% (11/190) 1.57 0.001297 0.005929
GO:0003824 catalytic activity 24.21% (46/190) 0.62 0.001577 0.007064
GO:0006952 defense response 1.05% (2/190) 4.96 0.001664 0.007308
GO:1901564 organonitrogen compound metabolic process 13.16% (25/190) 0.88 0.002212 0.009529
GO:0046483 heterocycle metabolic process 7.89% (15/190) 1.2 0.002384 0.009891
GO:0006725 cellular aromatic compound metabolic process 7.89% (15/190) 1.2 0.002347 0.009921
GO:1901360 organic cyclic compound metabolic process 7.89% (15/190) 1.17 0.002956 0.012037
GO:0044249 cellular biosynthetic process 6.84% (13/190) 1.26 0.003335 0.013341
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity 1.58% (3/190) 3.18 0.004359 0.017132
GO:0008152 metabolic process 21.05% (40/190) 0.59 0.004602 0.017473
GO:1901576 organic substance biosynthetic process 6.84% (13/190) 1.2 0.004536 0.017517
GO:0004112 cyclic-nucleotide phosphodiesterase activity 1.58% (3/190) 3.09 0.005209 0.019448
GO:0034641 cellular nitrogen compound metabolic process 8.42% (16/190) 1.02 0.005868 0.021549
GO:0009058 biosynthetic process 6.84% (13/190) 1.09 0.008792 0.031765
GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity 0.53% (1/190) 6.54 0.01071 0.038081
GO:0008081 phosphoric diester hydrolase activity 1.58% (3/190) 2.64 0.012338 0.043184
GO:0042578 phosphoric ester hydrolase activity 2.11% (4/190) 2.15 0.012649 0.043589
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Chlamydomonas reinhardtii HCCA clusters Cluster_29 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_67 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_15 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_114 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_147 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_169 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_158 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_272 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_177 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_186 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_11 0.02 Orthogroups_2024-Update Compare
Sequences (190) (download table)

InterPro Domains

GO Terms

Family Terms