Coexpression cluster: Cluster_122 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044454 nuclear chromosome part 2.9% (2/69) 6.7 0.000161 0.011766
GO:0044446 intracellular organelle part 8.7% (6/69) 2.93 0.000138 0.013494
GO:0044422 organelle part 8.7% (6/69) 2.93 0.000138 0.013494
GO:0005643 nuclear pore 2.9% (2/69) 6.17 0.000346 0.020282
GO:0044428 nuclear part 5.8% (4/69) 4.18 7.2e-05 0.021133
GO:0003674 molecular_function 47.83% (33/69) 0.73 0.000644 0.031434
GO:0009058 biosynthetic process 13.04% (9/69) 1.85 0.000813 0.034018
GO:0006897 endocytosis 1.45% (1/69) 7.87 0.004272 0.04172
GO:0004797 thymidine kinase activity 1.45% (1/69) 7.87 0.004272 0.04172
GO:0019136 deoxynucleoside kinase activity 1.45% (1/69) 7.87 0.004272 0.04172
GO:0098657 import into cell 1.45% (1/69) 7.87 0.004272 0.04172
GO:0019206 nucleoside kinase activity 1.45% (1/69) 7.87 0.004272 0.04172
GO:0003896 DNA primase activity 1.45% (1/69) 7.87 0.004272 0.04172
GO:0006490 oligosaccharide-lipid intermediate biosynthetic process 1.45% (1/69) 7.87 0.004272 0.04172
GO:0006269 DNA replication, synthesis of RNA primer 1.45% (1/69) 7.87 0.004272 0.04172
GO:0005664 nuclear origin of replication recognition complex 1.45% (1/69) 7.87 0.004272 0.04172
GO:0006488 dolichol-linked oligosaccharide biosynthetic process 1.45% (1/69) 7.87 0.004272 0.04172
GO:0000030 mannosyltransferase activity 1.45% (1/69) 7.87 0.004272 0.04172
GO:0016973 poly(A)+ mRNA export from nucleus 1.45% (1/69) 8.87 0.002138 0.044747
GO:0098847 sequence-specific single stranded DNA binding 1.45% (1/69) 8.87 0.002138 0.044747
GO:0004584 dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity 1.45% (1/69) 8.87 0.002138 0.044747
GO:0000781 chromosome, telomeric region 1.45% (1/69) 8.87 0.002138 0.044747
GO:0043047 single-stranded telomeric DNA binding 1.45% (1/69) 8.87 0.002138 0.044747
GO:0042162 telomeric DNA binding 1.45% (1/69) 8.87 0.002138 0.044747
GO:0000784 nuclear chromosome, telomeric region 1.45% (1/69) 8.87 0.002138 0.044747
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum pennellii HCCA clusters Cluster_147 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_30 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_105 0.021 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_32 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_167 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_169 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_255 0.024 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_268 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_134 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_17 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_132 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_204 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_288 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_154 0.019 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_84 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0146 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_72 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_83 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_229 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_261 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_338 0.028 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_217 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_87 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_207 0.036 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_176 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_191 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_35 0.024 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_36 0.023 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_85 0.023 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_138 0.023 Orthogroups_2024-Update Compare
Sequences (69) (download table)

InterPro Domains

GO Terms

Family Terms