Coexpression cluster: Cluster_204 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 66.67% (46/69) 0.87 0.0 4.7e-05
GO:0006396 RNA processing 10.14% (7/69) 4.0 0.0 7.2e-05
GO:0036260 RNA capping 2.9% (2/69) 8.34 9e-06 0.000416
GO:0009452 7-methylguanosine RNA capping 2.9% (2/69) 8.34 9e-06 0.000416
GO:0016070 RNA metabolic process 11.59% (8/69) 3.05 6e-06 0.000484
GO:0090304 nucleic acid metabolic process 13.04% (9/69) 2.72 9e-06 0.000571
GO:0043167 ion binding 28.99% (20/69) 1.39 3.6e-05 0.001375
GO:0070403 NAD+ binding 2.9% (2/69) 7.34 5.6e-05 0.001656
GO:0006139 nucleobase-containing compound metabolic process 13.04% (9/69) 2.38 5.3e-05 0.001758
GO:0046483 heterocycle metabolic process 13.04% (9/69) 2.21 0.000131 0.00315
GO:1901360 organic cyclic compound metabolic process 13.04% (9/69) 2.18 0.000157 0.003183
GO:0008033 tRNA processing 4.35% (3/69) 4.79 0.000173 0.003266
GO:0006725 cellular aromatic compound metabolic process 13.04% (9/69) 2.22 0.000127 0.003342
GO:0005488 binding 40.58% (28/69) 0.96 0.000155 0.003417
GO:0034641 cellular nitrogen compound metabolic process 14.49% (10/69) 1.98 0.000199 0.003505
GO:0034470 ncRNA processing 4.35% (3/69) 3.97 0.000943 0.015555
GO:0008173 RNA methyltransferase activity 2.9% (2/69) 5.34 0.001102 0.01712
GO:0008168 methyltransferase activity 5.8% (4/69) 2.96 0.001762 0.025837
GO:0016741 transferase activity, transferring one-carbon groups 5.8% (4/69) 2.88 0.002135 0.029666
GO:0043168 anion binding 17.39% (12/69) 1.33 0.002555 0.032123
GO:0006370 7-methylguanosine mRNA capping 1.45% (1/69) 8.34 0.003096 0.032696
GO:0031124 mRNA 3'-end processing 1.45% (1/69) 8.34 0.003096 0.032696
GO:0004484 mRNA guanylyltransferase activity 1.45% (1/69) 8.34 0.003096 0.032696
GO:0006399 tRNA metabolic process 4.35% (3/69) 3.48 0.0025 0.033004
GO:0003676 nucleic acid binding 13.04% (9/69) 1.58 0.002917 0.035004
GO:0044238 primary metabolic process 23.19% (16/69) 1.05 0.003537 0.035912
GO:0016787 hydrolase activity 15.94% (11/69) 1.24 0.006285 0.03687
GO:0070568 guanylyltransferase activity 1.45% (1/69) 7.34 0.006183 0.037098
GO:0016423 tRNA (guanine) methyltransferase activity 1.45% (1/69) 7.34 0.006183 0.037098
GO:0006551 leucine metabolic process 1.45% (1/69) 7.34 0.006183 0.037098
GO:0031123 RNA 3'-end processing 1.45% (1/69) 7.34 0.006183 0.037098
GO:0009098 leucine biosynthetic process 1.45% (1/69) 7.34 0.006183 0.037098
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity 1.45% (1/69) 7.34 0.006183 0.037098
GO:0031227 intrinsic component of endoplasmic reticulum membrane 1.45% (1/69) 7.34 0.006183 0.037098
GO:0030176 integral component of endoplasmic reticulum membrane 1.45% (1/69) 7.34 0.006183 0.037098
GO:0000030 mannosyltransferase activity 1.45% (1/69) 7.34 0.006183 0.037098
GO:0003852 2-isopropylmalate synthase activity 1.45% (1/69) 7.34 0.006183 0.037098
GO:0008192 RNA guanylyltransferase activity 1.45% (1/69) 7.34 0.006183 0.037098
GO:1901265 nucleoside phosphate binding 15.94% (11/69) 1.22 0.006725 0.037775
GO:0000166 nucleotide binding 15.94% (11/69) 1.22 0.006725 0.037775
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 5.8% (4/69) 2.4 0.006951 0.038228
GO:0097159 organic cyclic compound binding 24.64% (17/69) 0.98 0.004207 0.039663
GO:1901363 heterocyclic compound binding 24.64% (17/69) 0.98 0.004207 0.039663
GO:0006397 mRNA processing 2.9% (2/69) 4.29 0.004689 0.042684
GO:0019321 pentose metabolic process 1.45% (1/69) 6.75 0.00926 0.04289
GO:0046373 L-arabinose metabolic process 1.45% (1/69) 6.75 0.00926 0.04289
GO:0009082 branched-chain amino acid biosynthetic process 1.45% (1/69) 6.75 0.00926 0.04289
GO:0019566 arabinose metabolic process 1.45% (1/69) 6.75 0.00926 0.04289
GO:0009081 branched-chain amino acid metabolic process 1.45% (1/69) 6.75 0.00926 0.04289
GO:0046556 alpha-L-arabinofuranosidase activity 1.45% (1/69) 6.75 0.00926 0.04289
GO:0034660 ncRNA metabolic process 4.35% (3/69) 3.09 0.005345 0.045522
GO:0016071 mRNA metabolic process 2.9% (2/69) 4.17 0.005561 0.04588
GO:0016798 hydrolase activity, acting on glycosyl bonds 5.8% (4/69) 2.32 0.008537 0.045997
GO:0051287 NAD binding 2.9% (2/69) 4.21 0.005263 0.046312
GO:0043169 cation binding 11.59% (8/69) 1.44 0.009102 0.047117
GO:0036094 small molecule binding 15.94% (11/69) 1.17 0.009019 0.047619
GO:0071704 organic substance metabolic process 23.19% (16/69) 0.97 0.005983 0.047867
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_272 0.024 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_98 0.025 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_65 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_167 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_22 0.027 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_187 0.025 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_219 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_441 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_66 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_197 0.028 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_232 0.036 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_287 0.029 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_6 0.026 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_163 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_196 0.022 Orthogroups_2024-Update Compare
Sequences (69) (download table)

InterPro Domains

GO Terms

Family Terms