Coexpression cluster: Cluster_203 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006405 RNA export from nucleus 3.92% (2/51) 7.77 3.1e-05 0.000965
GO:0050657 nucleic acid transport 3.92% (2/51) 7.77 3.1e-05 0.000965
GO:0050658 RNA transport 3.92% (2/51) 7.77 3.1e-05 0.000965
GO:0051236 establishment of RNA localization 3.92% (2/51) 7.77 3.1e-05 0.000965
GO:0051028 mRNA transport 3.92% (2/51) 7.77 3.1e-05 0.000965
GO:0006406 mRNA export from nucleus 3.92% (2/51) 7.77 3.1e-05 0.000965
GO:0051168 nuclear export 3.92% (2/51) 7.77 3.1e-05 0.000965
GO:0051169 nuclear transport 3.92% (2/51) 6.77 0.000143 0.003484
GO:0006913 nucleocytoplasmic transport 3.92% (2/51) 6.77 0.000143 0.003484
GO:0015931 nucleobase-containing compound transport 3.92% (2/51) 6.07 0.000394 0.008671
GO:0044451 nucleoplasm part 3.92% (2/51) 5.19 0.001372 0.027446
GO:0004140 dephospho-CoA kinase activity 1.96% (1/51) 8.77 0.002289 0.027971
GO:0045893 positive regulation of transcription, DNA-templated 1.96% (1/51) 8.77 0.002289 0.027971
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 1.96% (1/51) 8.77 0.002289 0.027971
GO:0000124 SAGA complex 1.96% (1/51) 8.77 0.002289 0.027971
GO:1902680 positive regulation of RNA biosynthetic process 1.96% (1/51) 8.77 0.002289 0.027971
GO:0051254 positive regulation of RNA metabolic process 1.96% (1/51) 8.77 0.002289 0.027971
GO:1903508 positive regulation of nucleic acid-templated transcription 1.96% (1/51) 8.77 0.002289 0.027971
GO:0010604 positive regulation of macromolecule metabolic process 1.96% (1/51) 7.77 0.004572 0.033528
GO:0031325 positive regulation of cellular metabolic process 1.96% (1/51) 7.77 0.004572 0.033528
GO:0008541 proteasome regulatory particle, lid subcomplex 1.96% (1/51) 7.77 0.004572 0.033528
GO:0031328 positive regulation of cellular biosynthetic process 1.96% (1/51) 7.77 0.004572 0.033528
GO:0010628 positive regulation of gene expression 1.96% (1/51) 7.77 0.004572 0.033528
GO:0006368 transcription elongation from RNA polymerase II promoter 1.96% (1/51) 7.77 0.004572 0.033528
GO:0006354 DNA-templated transcription, elongation 1.96% (1/51) 7.77 0.004572 0.033528
GO:0010557 positive regulation of macromolecule biosynthetic process 1.96% (1/51) 7.77 0.004572 0.033528
GO:0009893 positive regulation of metabolic process 1.96% (1/51) 7.77 0.004572 0.033528
GO:0009891 positive regulation of biosynthetic process 1.96% (1/51) 7.77 0.004572 0.033528
GO:0051173 positive regulation of nitrogen compound metabolic process 1.96% (1/51) 7.77 0.004572 0.033528
GO:0016593 Cdc73/Paf1 complex 1.96% (1/51) 7.77 0.004572 0.033528
GO:0070461 SAGA-type complex 1.96% (1/51) 7.19 0.00685 0.047095
GO:0008023 transcription elongation factor complex 1.96% (1/51) 7.19 0.00685 0.047095
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA clusters Cluster_165 0.02 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_131 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_35 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_127 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_85 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_449 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_69 0.026 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0121 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_385 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_228 0.031 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_106 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_131 0.027 Orthogroups_2024-Update Compare
Sequences (51) (download table)

InterPro Domains

GO Terms

Family Terms