Coexpression cluster: Cluster_93 (HCCA clusters)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043038 amino acid activation 7.69% (4/52) 5.15 5e-06 0.000214
GO:0004812 aminoacyl-tRNA ligase activity 7.69% (4/52) 5.15 5e-06 0.000214
GO:0016875 ligase activity, forming carbon-oxygen bonds 7.69% (4/52) 5.15 5e-06 0.000214
GO:0043039 tRNA aminoacylation 7.69% (4/52) 5.15 5e-06 0.000214
GO:0034660 ncRNA metabolic process 9.62% (5/52) 4.71 1e-06 0.000292
GO:0140101 catalytic activity, acting on a tRNA 7.69% (4/52) 4.92 1e-05 0.000329
GO:0006399 tRNA metabolic process 7.69% (4/52) 4.72 1.7e-05 0.000498
GO:0016070 RNA metabolic process 11.54% (6/52) 3.34 2.7e-05 0.000706
GO:0006418 tRNA aminoacylation for protein translation 5.77% (3/52) 4.87 0.000153 0.003168
GO:0016874 ligase activity 7.69% (4/52) 3.92 0.000143 0.003297
GO:0006520 cellular amino acid metabolic process 7.69% (4/52) 3.77 0.000214 0.004021
GO:0090304 nucleic acid metabolic process 11.54% (6/52) 2.68 0.00033 0.005252
GO:0140098 catalytic activity, acting on RNA 9.62% (5/52) 3.07 0.000318 0.005482
GO:0035639 purine ribonucleoside triphosphate binding 23.08% (12/52) 1.49 0.000847 0.01252
GO:0006139 nucleobase-containing compound metabolic process 11.54% (6/52) 2.3 0.001341 0.018503
GO:0006725 cellular aromatic compound metabolic process 11.54% (6/52) 2.17 0.002073 0.020438
GO:0097367 carbohydrate derivative binding 23.08% (12/52) 1.35 0.001992 0.020612
GO:0046483 heterocycle metabolic process 11.54% (6/52) 2.19 0.00192 0.020916
GO:0017076 purine nucleotide binding 23.08% (12/52) 1.37 0.001723 0.020974
GO:0032553 ribonucleotide binding 23.08% (12/52) 1.36 0.001895 0.021791
GO:0032555 purine ribonucleotide binding 23.08% (12/52) 1.38 0.001691 0.021872
GO:1901879 regulation of protein depolymerization 1.92% (1/52) 7.85 0.004342 0.022468
GO:1902904 negative regulation of supramolecular fiber organization 1.92% (1/52) 7.85 0.004342 0.022468
GO:0043242 negative regulation of protein complex disassembly 1.92% (1/52) 7.85 0.004342 0.022468
GO:0051693 actin filament capping 1.92% (1/52) 7.85 0.004342 0.022468
GO:0031333 negative regulation of protein complex assembly 1.92% (1/52) 7.85 0.004342 0.022468
GO:0051494 negative regulation of cytoskeleton organization 1.92% (1/52) 7.85 0.004342 0.022468
GO:0051016 barbed-end actin filament capping 1.92% (1/52) 7.85 0.004342 0.022468
GO:1901880 negative regulation of protein depolymerization 1.92% (1/52) 7.85 0.004342 0.022468
GO:0030835 negative regulation of actin filament depolymerization 1.92% (1/52) 7.85 0.004342 0.022468
GO:0008290 F-actin capping protein complex 1.92% (1/52) 7.85 0.004342 0.022468
GO:0030834 regulation of actin filament depolymerization 1.92% (1/52) 7.85 0.004342 0.022468
GO:0032272 negative regulation of protein polymerization 1.92% (1/52) 7.85 0.004342 0.022468
GO:0030837 negative regulation of actin filament polymerization 1.92% (1/52) 7.85 0.004342 0.022468
GO:1901360 organic cyclic compound metabolic process 11.54% (6/52) 2.12 0.002447 0.023022
GO:0005524 ATP binding 19.23% (10/52) 1.35 0.004993 0.025207
GO:0043168 anion binding 23.08% (12/52) 1.18 0.005185 0.025555
GO:0036094 small molecule binding 23.08% (12/52) 1.17 0.005523 0.02659
GO:0005488 binding 48.08% (25/52) 0.65 0.00622 0.029263
GO:0032970 regulation of actin filament-based process 1.92% (1/52) 6.85 0.008665 0.029894
GO:0043254 regulation of protein complex assembly 1.92% (1/52) 6.85 0.008665 0.029894
GO:0044087 regulation of cellular component biogenesis 1.92% (1/52) 6.85 0.008665 0.029894
GO:0008064 regulation of actin polymerization or depolymerization 1.92% (1/52) 6.85 0.008665 0.029894
GO:0051493 regulation of cytoskeleton organization 1.92% (1/52) 6.85 0.008665 0.029894
GO:0030833 regulation of actin filament polymerization 1.92% (1/52) 6.85 0.008665 0.029894
GO:0032956 regulation of actin cytoskeleton organization 1.92% (1/52) 6.85 0.008665 0.029894
GO:0032535 regulation of cellular component size 1.92% (1/52) 6.85 0.008665 0.029894
GO:0032271 regulation of protein polymerization 1.92% (1/52) 6.85 0.008665 0.029894
GO:1902903 regulation of supramolecular fiber organization 1.92% (1/52) 6.85 0.008665 0.029894
GO:0030832 regulation of actin filament length 1.92% (1/52) 6.85 0.008665 0.029894
GO:0090066 regulation of anatomical structure size 1.92% (1/52) 6.85 0.008665 0.029894
GO:0110053 regulation of actin filament organization 1.92% (1/52) 6.85 0.008665 0.029894
GO:0030554 adenyl nucleotide binding 19.23% (10/52) 1.22 0.009124 0.030463
GO:0032559 adenyl ribonucleotide binding 19.23% (10/52) 1.22 0.009041 0.030681
GO:0034641 cellular nitrogen compound metabolic process 11.54% (6/52) 1.72 0.009344 0.030702
GO:0006082 organic acid metabolic process 7.69% (4/52) 2.63 0.004014 0.030777
GO:0043436 oxoacid metabolic process 7.69% (4/52) 2.63 0.003983 0.031708
GO:0000166 nucleotide binding 23.08% (12/52) 1.23 0.003912 0.032395
GO:1901265 nucleoside phosphate binding 23.08% (12/52) 1.23 0.003912 0.032395
GO:0008144 drug binding 19.23% (10/52) 1.27 0.007361 0.032421
GO:0051129 negative regulation of cellular component organization 1.92% (1/52) 7.11 0.007226 0.032516
GO:0010639 negative regulation of organelle organization 1.92% (1/52) 7.11 0.007226 0.032516
GO:1901363 heterocyclic compound binding 32.69% (17/52) 0.82 0.01047 0.033343
GO:0097159 organic cyclic compound binding 32.69% (17/52) 0.82 0.01047 0.033343
GO:0019752 carboxylic acid metabolic process 7.69% (4/52) 2.64 0.003858 0.034718
GO:0033043 regulation of organelle organization 1.92% (1/52) 6.26 0.01297 0.04007
GO:0043244 regulation of protein complex disassembly 1.92% (1/52) 6.26 0.01297 0.04007
GO:0044281 small molecule metabolic process 7.69% (4/52) 2.09 0.014398 0.043831
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_42 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_81 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_200 0.019 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_213 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_170 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_201 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_258 0.031 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_284 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_66 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_172 0.031 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_37 0.022 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_140 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_151 0.024 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_76 0.022 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_86 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_215 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_10 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_75 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_153 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_188 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_360 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_393 0.029 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_428 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_443 0.029 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_458 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_509 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_514 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_17 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_130 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_152 0.025 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_53 0.026 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_79 0.028 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_44 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_67 0.023 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_74 0.027 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_157 0.021 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0051 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_44 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_66 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_193 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_323 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_326 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_340 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_155 0.028 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_75 0.03 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_94 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_56 0.028 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_58 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_160 0.023 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_114 0.023 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_136 0.021 Orthogroups_2024-Update Compare
Sequences (52) (download table)

InterPro Domains

GO Terms

Family Terms