Coexpression cluster: Cluster_506 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006520 cellular amino acid metabolic process 8.16% (4/49) 4.15 7.8e-05 0.014738
GO:0090304 nucleic acid metabolic process 10.2% (5/49) 2.69 0.001059 0.018096
GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds 2.04% (1/49) 9.08 0.001853 0.01935
GO:0016429 tRNA (adenine-N1-)-methyltransferase activity 2.04% (1/49) 9.08 0.001853 0.01935
GO:0004334 fumarylacetoacetase activity 2.04% (1/49) 9.08 0.001853 0.01935
GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances 2.04% (1/49) 9.08 0.001853 0.01935
GO:0016426 tRNA (adenine) methyltransferase activity 2.04% (1/49) 9.08 0.001853 0.01935
GO:0004819 glutamine-tRNA ligase activity 2.04% (1/49) 9.08 0.001853 0.01935
GO:0006425 glutaminyl-tRNA aminoacylation 2.04% (1/49) 9.08 0.001853 0.01935
GO:1901360 organic cyclic compound metabolic process 12.24% (6/49) 2.36 0.001051 0.019761
GO:0006082 organic acid metabolic process 8.16% (4/49) 3.17 0.001013 0.021165
GO:0016070 RNA metabolic process 8.16% (4/49) 2.83 0.002421 0.021676
GO:0043039 tRNA aminoacylation 4.08% (2/49) 4.63 0.002993 0.02251
GO:0043038 amino acid activation 4.08% (2/49) 4.63 0.002993 0.02251
GO:0140101 catalytic activity, acting on a tRNA 6.12% (3/49) 4.65 0.000241 0.022636
GO:0006418 tRNA aminoacylation for protein translation 4.08% (2/49) 4.79 0.002416 0.022707
GO:0140098 catalytic activity, acting on RNA 6.12% (3/49) 3.52 0.00233 0.023058
GO:0043527 tRNA methyltransferase complex 2.04% (1/49) 8.08 0.003702 0.023199
GO:0031515 tRNA (m1A) methyltransferase complex 2.04% (1/49) 8.08 0.003702 0.023199
GO:0030488 tRNA methylation 2.04% (1/49) 8.08 0.003702 0.023199
GO:0034708 methyltransferase complex 2.04% (1/49) 8.08 0.003702 0.023199
GO:0006399 tRNA metabolic process 6.12% (3/49) 4.43 0.000375 0.023481
GO:0043436 oxoacid metabolic process 8.16% (4/49) 3.18 0.001005 0.023627
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.08% (2/49) 4.65 0.002926 0.023919
GO:0004812 aminoacyl-tRNA ligase activity 4.08% (2/49) 4.65 0.002926 0.023919
GO:0006139 nucleobase-containing compound metabolic process 10.2% (5/49) 2.3 0.003361 0.024303
GO:0019752 carboxylic acid metabolic process 8.16% (4/49) 3.2 0.00096 0.02577
GO:0008175 tRNA methyltransferase activity 2.04% (1/49) 7.75 0.004625 0.027174
GO:0044281 small molecule metabolic process 8.16% (4/49) 2.58 0.004492 0.027241
GO:0034641 cellular nitrogen compound metabolic process 12.24% (6/49) 1.92 0.004861 0.027692
GO:0034660 ncRNA metabolic process 6.12% (3/49) 4.08 0.000768 0.028878
GO:0006725 cellular aromatic compound metabolic process 12.24% (6/49) 2.39 0.00094 0.02946
GO:0046483 heterocycle metabolic process 10.2% (5/49) 2.14 0.005377 0.029733
GO:0016874 ligase activity 6.12% (3/49) 4.15 0.000658 0.03092
GO:0006528 asparagine metabolic process 2.04% (1/49) 7.08 0.007391 0.037552
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity 2.04% (1/49) 7.08 0.007391 0.037552
GO:0006529 asparagine biosynthetic process 2.04% (1/49) 7.08 0.007391 0.037552
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_80 0.029 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_146 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_205 0.029 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_208 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_210 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_281 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_57 0.024 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_74 0.019 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_105 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_124 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_140 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_164 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_254 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_353 0.03 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_414 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_6 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_62 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_107 0.03 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_192 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_182 0.03 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_297 0.027 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_47 0.027 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_58 0.024 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_117 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_98 0.033 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_215 0.023 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_235 0.041 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_1 0.027 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_166 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_181 0.032 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_16 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_146 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_356 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_393 0.03 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_444 0.032 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_451 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_468 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_497 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_499 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_1 0.027 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_20 0.024 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_95 0.029 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_139 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_164 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_204 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_226 0.021 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0054 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0095 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_158 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_167 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_168 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_236 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_242 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_250 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_361 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_366 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_135 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_167 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_56 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_138 0.027 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_159 0.02 Orthogroups_2024-Update Compare
Sequences (49) (download table)

InterPro Domains

GO Terms

Family Terms