Coexpression cluster: Cluster_2 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0080134 regulation of response to stress 2.99% (2/67) 8.53 7e-06 0.000459
GO:1902882 regulation of response to oxidative stress 2.99% (2/67) 8.53 7e-06 0.000459
GO:1901031 regulation of response to reactive oxygen species 2.99% (2/67) 8.53 7e-06 0.000459
GO:0048583 regulation of response to stimulus 2.99% (2/67) 6.2 0.000322 0.015275
GO:0006446 regulation of translational initiation 1.49% (1/67) 8.53 0.002712 0.032209
GO:0008190 eukaryotic initiation factor 4E binding 1.49% (1/67) 8.53 0.002712 0.032209
GO:0016180 snRNA processing 1.49% (1/67) 8.53 0.002712 0.032209
GO:0016073 snRNA metabolic process 1.49% (1/67) 8.53 0.002712 0.032209
GO:0043628 ncRNA 3'-end processing 1.49% (1/67) 8.53 0.002712 0.032209
GO:0034472 snRNA 3'-end processing 1.49% (1/67) 8.53 0.002712 0.032209
GO:0045947 negative regulation of translational initiation 1.49% (1/67) 8.53 0.002712 0.032209
GO:0017148 negative regulation of translation 1.49% (1/67) 8.53 0.002712 0.032209
GO:0034249 negative regulation of cellular amide metabolic process 1.49% (1/67) 8.53 0.002712 0.032209
GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity 1.49% (1/67) 8.53 0.002712 0.032209
GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor 1.49% (1/67) 8.53 0.002712 0.032209
GO:0034477 U6 snRNA 3'-end processing 1.49% (1/67) 8.53 0.002712 0.032209
GO:0070279 vitamin B6 binding 2.99% (2/67) 4.57 0.003203 0.03381
GO:0030170 pyridoxal phosphate binding 2.99% (2/67) 4.57 0.003203 0.03381
GO:0048037 cofactor binding 5.97% (4/67) 2.67 0.003603 0.03603
GO:0019842 vitamin binding 2.99% (2/67) 4.17 0.005551 0.043944
GO:0032269 negative regulation of cellular protein metabolic process 1.49% (1/67) 7.53 0.005417 0.044753
GO:0051248 negative regulation of protein metabolic process 1.49% (1/67) 7.53 0.005417 0.044753
GO:0031369 translation initiation factor binding 1.49% (1/67) 7.53 0.005417 0.044753
GO:0050662 coenzyme binding 4.48% (3/67) 3.02 0.006048 0.045964
GO:0006721 terpenoid metabolic process 1.49% (1/67) 6.94 0.008115 0.049739
GO:0034248 regulation of cellular amide metabolic process 1.49% (1/67) 6.94 0.008115 0.049739
GO:0016114 terpenoid biosynthetic process 1.49% (1/67) 6.94 0.008115 0.049739
GO:0010608 posttranscriptional regulation of gene expression 1.49% (1/67) 6.94 0.008115 0.049739
GO:0009235 cobalamin metabolic process 1.49% (1/67) 6.94 0.008115 0.049739
GO:0006417 regulation of translation 1.49% (1/67) 6.94 0.008115 0.049739
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA clusters Cluster_7 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_96 0.028 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_153 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_129 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_375 0.023 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_38 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_109 0.022 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_81 0.027 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0063 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0174 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_23 0.026 Orthogroups_2024-Update Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms