Coexpression cluster: Cluster_21 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 40.82% (80/196) 0.75 0.0 4.1e-05
GO:0005488 binding 28.06% (55/196) 1.03 0.0 4.2e-05
GO:0000439 transcription factor TFIIH core complex 1.02% (2/196) 7.34 5.7e-05 0.003155
GO:0097159 organic cyclic compound binding 17.35% (34/196) 1.03 5.2e-05 0.003457
GO:1901363 heterocyclic compound binding 17.35% (34/196) 1.03 5.2e-05 0.003457
GO:0003676 nucleic acid binding 10.2% (20/196) 1.49 3.6e-05 0.003995
GO:0044428 nuclear part 2.55% (5/196) 3.45 0.000103 0.004917
GO:0051716 cellular response to stimulus 2.04% (4/196) 3.67 0.000296 0.009876
GO:0033554 cellular response to stress 2.04% (4/196) 3.67 0.000296 0.009876
GO:0006974 cellular response to DNA damage stimulus 2.04% (4/196) 3.67 0.000296 0.009876
GO:0006289 nucleotide-excision repair 1.02% (2/196) 6.02 0.00042 0.01275
GO:0090304 nucleic acid metabolic process 4.59% (9/196) 1.92 0.000718 0.019975
GO:0044798 nuclear transcription factor complex 1.02% (2/196) 5.02 0.001737 0.038683
GO:0090575 RNA polymerase II transcription factor complex 1.02% (2/196) 5.02 0.001737 0.038683
GO:0003723 RNA binding 3.06% (6/196) 2.28 0.001611 0.041393
GO:0046483 heterocycle metabolic process 5.1% (10/196) 1.56 0.002305 0.048116
GO:0000814 ESCRT II complex 0.51% (1/196) 8.34 0.003088 0.049107
GO:0008531 riboflavin kinase activity 0.51% (1/196) 8.34 0.003088 0.049107
GO:0005515 protein binding 8.67% (17/196) 1.11 0.002514 0.0494
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_166 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_218 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_273 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_20 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_54 0.034 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_67 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_95 0.023 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_137 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_142 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_178 0.019 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_25 0.021 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_88 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_32 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_1 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_75 0.019 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_78 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_143 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_289 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_303 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_323 0.032 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_453 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_486 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_52 0.024 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_106 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_120 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_52 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_80 0.019 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0017 0.025 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0109 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0130 0.019 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0034 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0061 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0130 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_4 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_287 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_18 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_46 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_62 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_90 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_69 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_110 0.024 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_151 0.019 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_160 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_163 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_167 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_108 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_182 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_215 0.019 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_55 0.02 Orthogroups_2024-Update Compare
Sequences (196) (download table)

InterPro Domains

GO Terms

Family Terms