Coexpression cluster: Cluster_101 (HCAA Clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051173 positive regulation of nitrogen compound metabolic process 2.99% (2/67) 7.59 3.5e-05 0.001246
GO:0010628 positive regulation of gene expression 2.99% (2/67) 7.59 3.5e-05 0.001246
GO:0010604 positive regulation of macromolecule metabolic process 2.99% (2/67) 7.59 3.5e-05 0.001246
GO:0010557 positive regulation of macromolecule biosynthetic process 2.99% (2/67) 7.59 3.5e-05 0.001246
GO:0031325 positive regulation of cellular metabolic process 2.99% (2/67) 7.59 3.5e-05 0.001246
GO:0031328 positive regulation of cellular biosynthetic process 2.99% (2/67) 7.59 3.5e-05 0.001246
GO:0009891 positive regulation of biosynthetic process 2.99% (2/67) 7.59 3.5e-05 0.001246
GO:0009893 positive regulation of metabolic process 2.99% (2/67) 7.59 3.5e-05 0.001246
GO:1990234 transferase complex 4.48% (3/67) 4.91 0.000134 0.004244
GO:0048522 positive regulation of cellular process 2.99% (2/67) 6.37 0.000243 0.006915
GO:0048518 positive regulation of biological process 2.99% (2/67) 6.01 0.000416 0.010729
GO:0043412 macromolecule modification 11.94% (8/67) 2.02 0.000754 0.017851
GO:0051128 regulation of cellular component organization 2.99% (2/67) 5.48 0.000892 0.019494
GO:0006400 tRNA modification 2.99% (2/67) 5.37 0.001039 0.021072
GO:1901976 regulation of cell cycle checkpoint 1.49% (1/67) 8.18 0.00345 0.025122
GO:0006417 regulation of translation 1.49% (1/67) 8.18 0.00345 0.025122
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity 1.49% (1/67) 8.18 0.00345 0.025122
GO:0003855 3-dehydroquinate dehydratase activity 1.49% (1/67) 8.18 0.00345 0.025122
GO:0090231 regulation of spindle checkpoint 1.49% (1/67) 8.18 0.00345 0.025122
GO:1903504 regulation of mitotic spindle checkpoint 1.49% (1/67) 8.18 0.00345 0.025122
GO:0006449 regulation of translational termination 1.49% (1/67) 8.18 0.00345 0.025122
GO:0006448 regulation of translational elongation 1.49% (1/67) 8.18 0.00345 0.025122
GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint 1.49% (1/67) 8.18 0.00345 0.025122
GO:0010608 posttranscriptional regulation of gene expression 1.49% (1/67) 8.18 0.00345 0.025122
GO:0032270 positive regulation of cellular protein metabolic process 1.49% (1/67) 8.18 0.00345 0.025122
GO:0034248 regulation of cellular amide metabolic process 1.49% (1/67) 8.18 0.00345 0.025122
GO:0045727 positive regulation of translation 1.49% (1/67) 8.18 0.00345 0.025122
GO:0043243 positive regulation of protein complex disassembly 1.49% (1/67) 8.18 0.00345 0.025122
GO:0045116 protein neddylation 1.49% (1/67) 8.18 0.00345 0.025122
GO:0019107 myristoyltransferase activity 1.49% (1/67) 8.18 0.00345 0.025122
GO:0051247 positive regulation of protein metabolic process 1.49% (1/67) 8.18 0.00345 0.025122
GO:0034998 oligosaccharyltransferase I complex 1.49% (1/67) 8.18 0.00345 0.025122
GO:0004379 glycylpeptide N-tetradecanoyltransferase activity 1.49% (1/67) 8.18 0.00345 0.025122
GO:0034250 positive regulation of cellular amide metabolic process 1.49% (1/67) 8.18 0.00345 0.025122
GO:0045905 positive regulation of translational termination 1.49% (1/67) 8.18 0.00345 0.025122
GO:0045901 positive regulation of translational elongation 1.49% (1/67) 8.18 0.00345 0.025122
GO:0019781 NEDD8 activating enzyme activity 1.49% (1/67) 8.18 0.00345 0.025122
GO:0008033 tRNA processing 2.99% (2/67) 4.27 0.004792 0.033193
GO:0007346 regulation of mitotic cell cycle 1.49% (1/67) 6.59 0.010315 0.03367
GO:0007062 sister chromatid cohesion 1.49% (1/67) 6.59 0.010315 0.03367
GO:0007088 regulation of mitotic nuclear division 1.49% (1/67) 6.59 0.010315 0.03367
GO:0051236 establishment of RNA localization 1.49% (1/67) 6.59 0.010315 0.03367
GO:0030071 regulation of mitotic metaphase/anaphase transition 1.49% (1/67) 6.59 0.010315 0.03367
GO:0043244 regulation of protein complex disassembly 1.49% (1/67) 6.59 0.010315 0.03367
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 1.49% (1/67) 6.59 0.010315 0.03367
GO:1905818 regulation of chromosome separation 1.49% (1/67) 6.59 0.010315 0.03367
GO:0051783 regulation of nuclear division 1.49% (1/67) 6.59 0.010315 0.03367
GO:0051983 regulation of chromosome segregation 1.49% (1/67) 6.59 0.010315 0.03367
GO:1901987 regulation of cell cycle phase transition 1.49% (1/67) 6.59 0.010315 0.03367
GO:1901990 regulation of mitotic cell cycle phase transition 1.49% (1/67) 6.59 0.010315 0.03367
GO:0033047 regulation of mitotic sister chromatid segregation 1.49% (1/67) 6.59 0.010315 0.03367
GO:0070461 SAGA-type complex 1.49% (1/67) 6.59 0.010315 0.03367
GO:0033045 regulation of sister chromatid segregation 1.49% (1/67) 6.59 0.010315 0.03367
GO:0007064 mitotic sister chromatid cohesion 1.49% (1/67) 6.59 0.010315 0.03367
GO:0010965 regulation of mitotic sister chromatid separation 1.49% (1/67) 6.59 0.010315 0.03367
GO:0006405 RNA export from nucleus 1.49% (1/67) 6.59 0.010315 0.03367
GO:0006406 mRNA export from nucleus 1.49% (1/67) 6.59 0.010315 0.03367
GO:0050657 nucleic acid transport 1.49% (1/67) 6.59 0.010315 0.03367
GO:0050658 RNA transport 1.49% (1/67) 6.59 0.010315 0.03367
GO:0008250 oligosaccharyltransferase complex 1.49% (1/67) 6.59 0.010315 0.03367
GO:0051028 mRNA transport 1.49% (1/67) 6.59 0.010315 0.03367
GO:0051168 nuclear export 1.49% (1/67) 6.59 0.010315 0.03367
GO:0140096 catalytic activity, acting on a protein 10.45% (7/67) 1.53 0.010478 0.033817
GO:0043170 macromolecule metabolic process 16.42% (11/67) 1.29 0.004789 0.034001
GO:0006807 nitrogen compound metabolic process 16.42% (11/67) 1.13 0.010781 0.034403
GO:1903508 positive regulation of nucleic acid-templated transcription 1.49% (1/67) 7.18 0.006888 0.036909
GO:0003713 transcription coactivator activity 1.49% (1/67) 7.18 0.006888 0.036909
GO:0000124 SAGA complex 1.49% (1/67) 7.18 0.006888 0.036909
GO:0034227 tRNA thio-modification 1.49% (1/67) 7.18 0.006888 0.036909
GO:0004560 alpha-L-fucosidase activity 1.49% (1/67) 7.18 0.006888 0.036909
GO:0043022 ribosome binding 1.49% (1/67) 7.18 0.006888 0.036909
GO:1902680 positive regulation of RNA biosynthetic process 1.49% (1/67) 7.18 0.006888 0.036909
GO:0015928 fucosidase activity 1.49% (1/67) 7.18 0.006888 0.036909
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 1.49% (1/67) 7.18 0.006888 0.036909
GO:0045893 positive regulation of transcription, DNA-templated 1.49% (1/67) 7.18 0.006888 0.036909
GO:0051254 positive regulation of RNA metabolic process 1.49% (1/67) 7.18 0.006888 0.036909
GO:0031390 Ctf18 RFC-like complex 1.49% (1/67) 7.18 0.006888 0.036909
GO:0071704 organic substance metabolic process 19.4% (13/67) 0.99 0.011768 0.037136
GO:0009451 RNA modification 2.99% (2/67) 3.97 0.007224 0.0373
GO:0032446 protein modification by small protein conjugation 2.99% (2/67) 3.97 0.007224 0.0373
GO:1901564 organonitrogen compound metabolic process 13.43% (9/67) 1.26 0.012069 0.037665
GO:0032991 protein-containing complex 8.96% (6/67) 1.79 0.007633 0.038712
GO:0050794 regulation of cellular process 5.97% (4/67) 2.15 0.012609 0.038925
GO:0044238 primary metabolic process 19.4% (13/67) 1.07 0.007863 0.039177
GO:0000152 nuclear ubiquitin ligase complex 1.49% (1/67) 6.18 0.013729 0.039385
GO:0005680 anaphase-promoting complex 1.49% (1/67) 6.18 0.013729 0.039385
GO:0033588 Elongator holoenzyme complex 1.49% (1/67) 6.18 0.013729 0.039385
GO:0010564 regulation of cell cycle process 1.49% (1/67) 6.18 0.013729 0.039385
GO:0043021 ribonucleoprotein complex binding 1.49% (1/67) 6.18 0.013729 0.039385
GO:0004177 aminopeptidase activity 1.49% (1/67) 6.18 0.013729 0.039385
GO:0033044 regulation of chromosome organization 1.49% (1/67) 6.18 0.013729 0.039385
GO:0044464 cell part 10.45% (7/67) 1.44 0.014455 0.040646
GO:0070647 protein modification by small protein conjugation or removal 2.99% (2/67) 3.45 0.014427 0.040972
GO:0044446 intracellular organelle part 5.97% (4/67) 2.32 0.008578 0.041289
GO:0044422 organelle part 5.97% (4/67) 2.32 0.008578 0.041289
GO:0044424 intracellular part 10.45% (7/67) 1.57 0.009096 0.043055
GO:0050789 regulation of biological process 5.97% (4/67) 2.06 0.015564 0.043336
GO:0034470 ncRNA processing 2.99% (2/67) 3.37 0.016016 0.044162
GO:0044267 cellular protein metabolic process 10.45% (7/67) 1.55 0.009589 0.044642
GO:0002098 tRNA wobble uridine modification 1.49% (1/67) 5.86 0.017132 0.045052
GO:0051130 positive regulation of cellular component organization 1.49% (1/67) 5.86 0.017132 0.045052
GO:0000123 histone acetyltransferase complex 1.49% (1/67) 5.86 0.017132 0.045052
GO:0031461 cullin-RING ubiquitin ligase complex 1.49% (1/67) 5.86 0.017132 0.045052
GO:0006487 protein N-linked glycosylation 1.49% (1/67) 5.86 0.017132 0.045052
GO:0006464 cellular protein modification process 8.96% (6/67) 1.71 0.009999 0.045075
GO:0036211 protein modification process 8.96% (6/67) 1.71 0.009999 0.045075
GO:0019538 protein metabolic process 13.43% (9/67) 1.63 0.002381 0.045076
GO:0070011 peptidase activity, acting on L-amino acid peptides 4.48% (3/67) 2.42 0.018491 0.048177
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_114 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_44 0.029 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_124 0.029 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_164 0.034 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_182 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_186 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_274 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_60 0.019 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_438 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_18 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_173 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_236 0.021 Orthogroups_2024-Update Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms