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Heatmap: Cluster_52 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
-1.39 0.11 -0.48 -1.32 -1.93 0.8 0.92 0.93 0.79 0.17 -0.76 -2.43
-1.34 -0.66 0.06 -0.11 -0.08 0.26 0.22 0.57 0.54 0.27 -0.03 -0.81
- - 1.42 - 0.78 - 1.1 0.52 2.01 - - -
- -1.02 1.12 1.23 -0.87 2.01 1.04 -1.51 - - - -
- - - - - 1.68 1.57 1.74 0.36 0.26 - -
- - - - - 3.58 - - - - - -
- 0.68 0.81 0.48 0.54 2.38 - -0.81 - - - -
- - - - - 2.3 - 2.82 - - - -
- - - - - 3.58 - - - - - -
1.51 -1.46 -0.33 - - -0.76 0.3 0.94 0.64 0.41 - 0.45
0.37 -0.15 -0.15 -0.19 0.16 0.37 0.09 0.27 0.09 -0.17 -0.15 -1.03
- -1.49 -1.17 -0.54 -0.5 0.97 -0.7 0.58 0.25 0.21 0.76 0.76
- - - - - 2.8 0.69 0.02 - - - 1.27
- - - - - 3.3 - 1.1 - - - -
- -1.16 -1.02 - 0.49 1.35 1.14 1.65 -0.19 - -0.19 -
- - - - - 2.45 0.93 0.44 1.72 - - -
- - - - - 3.58 - - - - - -
- -1.98 - 0.98 - -0.27 -0.21 -0.42 1.69 -0.11 0.53 0.8
- - - - - 1.86 - - - - - 3.07
- - - - - 3.28 1.18 - - - - -
- - - - - 2.09 0.57 1.89 1.36 - - -
- 0.72 - - - - - 1.94 1.82 1.59 - -
- 1.02 - - - 1.73 1.2 - 2.12 - - -
- - - - - 2.82 2.3 - - - - -
- - - - - 1.32 1.38 1.17 2.22 - - -
- - - - - 1.89 2.1 -0.31 1.16 - - -0.05
- - - 0.09 1.3 1.57 0.21 -0.21 - 0.15 1.25 -
- - - - - - - - 3.58 - - -
0.02 -0.51 -0.5 0.12 -0.03 0.58 0.3 -0.3 -0.14 0.29 0.06 -0.31
-0.21 -0.8 -1.49 0.26 0.33 0.9 0.47 -0.47 0.07 -0.06 -0.06 -0.29
- -2.94 -1.81 - - 1.46 1.21 1.13 1.23 0.07 -0.53 -2.17
- - - - - 3.58 - - - - - -
- - - - - 0.84 1.64 0.65 2.17 0.01 - -
- - - - - 1.49 0.97 0.76 1.8 0.07 0.03 -
-0.26 0.03 0.2 0.13 -0.09 0.68 0.01 0.03 -0.38 -0.11 -0.17 -0.42
- - - - - 3.58 - - - - - -
-0.11 -0.29 -0.13 -0.22 -0.19 0.18 0.02 0.42 0.24 0.25 -0.1 -0.28
0.59 1.18 - -1.59 - 0.2 0.11 -0.88 0.29 0.25 0.12 0.71
- 0.57 - -0.9 0.54 0.58 -0.79 0.2 0.93 0.66 -0.61 0.21
- -2.17 - - -0.62 1.81 1.23 0.68 1.12 -0.3 - -0.54
-0.38 -0.57 -0.43 -0.72 -0.02 0.2 0.33 0.57 0.29 0.48 -0.14 -0.3
- - - - - 2.88 - - - - - 2.22
1.15 -0.36 -1.3 -0.9 -0.55 -0.26 -0.55 0.5 0.36 0.38 0.17 -0.45
- - - - 1.61 3.16 - - - - - -
- - - - - 3.58 - - - - - -
- - 0.93 0.02 - 1.64 - -0.06 -0.47 - - 2.1
- - - - - 3.58 - - - - - -
0.13 0.32 -0.0 -0.06 -0.0 0.21 0.36 -0.0 0.11 -0.1 -0.5 -0.88
- -0.9 - 0.91 0.65 0.81 -0.71 0.97 1.2 0.48 - -
- - - - - - 1.53 1.86 2.45 - - -
- - - - - - - 1.43 2.85 1.08 - -
- 0.23 - 1.03 - - 0.41 - 2.33 - - 1.28
0.58 0.36 0.07 -0.52 0.22 0.69 -0.21 -0.48 -0.74 -0.18 -0.27 -0.31
- -2.84 - -1.25 - 1.87 0.97 0.87 -0.24 1.1 -2.01 -0.39
- - 1.27 1.58 - 0.47 - - 1.87 0.64 - -
- -1.72 - -0.92 0.14 0.57 -0.12 0.91 1.9 -0.35 -0.62 -0.67
- - - - - 2.88 - - - - - 2.22
- - - - - 1.77 1.25 1.16 1.04 0.94 - -
-0.95 -0.61 -0.69 -0.2 -0.09 0.53 0.12 0.17 0.59 0.1 0.44 -0.3
-0.32 0.14 0.39 0.92 0.02 0.61 0.49 0.02 -0.72 -0.74 -1.41 -1.51
- -0.62 - -0.03 -1.47 1.08 -0.02 0.75 -0.52 1.19 -0.52 0.64
- - - - - - - - 3.58 - - -
- 1.52 - 0.74 - - 0.11 -0.56 2.03 - - 0.7
-1.34 -1.04 0.1 -0.83 -1.12 0.71 -0.36 -0.12 -0.09 0.37 0.15 1.23
0.08 -0.1 -1.1 0.0 -0.14 0.54 0.43 0.2 0.12 0.04 -0.12 -0.63
0.98 0.55 - -1.19 -1.14 -1.29 0.41 -0.13 1.07 0.14 -1.17 0.45
1.19 -0.79 - -0.98 -0.64 - 0.27 0.75 0.86 0.08 0.19 0.13
- -1.25 - -0.45 0.76 1.45 -0.33 0.03 -0.16 -0.38 1.16 -0.49
- - 1.85 - - - - 0.42 2.82 - - -
- - -0.71 - -1.7 0.86 1.45 1.3 0.75 0.02 0.12 -1.8
- - - - -1.41 2.14 -0.64 0.26 2.25 -0.69 - -
- 1.61 - - - 2.8 - - - 0.97 - -
- -0.99 - -2.14 -1.79 1.35 1.24 0.19 0.1 1.37 -0.11 -1.49
- -1.67 -0.27 0.0 0.43 0.03 0.6 -0.08 1.2 0.64 -0.04 -2.42
- - - - 1.12 - - 1.35 2.35 1.12 - -
- - - - - 2.0 - 2.45 - - - 1.34
- - - - - 3.58 - - - - - -
- -2.53 0.45 - -0.38 0.98 -0.47 0.86 0.03 0.61 0.79 -0.16
- - - - - 3.58 - - - - - -
- - - - - - - - 3.58 - - -
- -1.58 -0.08 - 0.67 1.71 1.83 0.07 -0.61 -0.71 - -
1.25 1.27 - -0.92 -1.58 - -0.81 -1.12 0.95 0.41 - 1.04
- - - - - - - - 3.58 - - -
- - 0.08 -2.21 -0.77 -1.31 -0.09 0.4 1.64 1.07 0.59 -0.38
- - - - 0.49 1.04 0.52 2.21 1.31 - - -
- - - - - 1.71 - 1.58 1.52 - 1.52 -
-0.11 -0.55 -0.13 -0.02 -0.04 0.41 0.1 0.46 0.27 0.12 -0.19 -0.79
- -0.29 -1.05 -0.25 -0.02 0.67 0.25 0.57 0.62 0.55 0.14 -0.98
- - - - - - - - 3.27 - - 1.22
-0.39 -1.42 -0.39 1.33 0.67 1.11 1.04 -0.81 -0.77 -1.22 -2.54 -
- - - 0.08 1.29 2.3 -0.54 0.88 - - - 0.04
- - - - - - - - 3.58 - - -
- - - 2.43 - - - - 2.72 - - -
- - - - - 2.19 - 2.14 - - 1.59 -
- - - 0.53 - 2.01 - 0.82 0.82 1.1 - -0.23
- - - - - 3.58 - - - - - -
- 0.22 0.41 0.08 0.29 1.3 1.33 0.18 - - - 0.19
- - 0.42 - 0.15 1.58 1.47 0.38 0.26 - 0.39 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.