Heatmap: Cluster_16 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
-4.99 -3.43 -4.18 -4.72 -7.11 - 0.76 1.56 1.38 0.8 0.77 0.1
-1.3 -1.48 - -5.06 -5.71 -0.84 -0.74 0.19 1.84 1.6 0.63 -0.45
0.33 -0.16 -0.85 -0.44 0.17 -0.33 -0.51 -0.16 0.41 0.32 0.35 0.25
-3.75 -4.26 -4.46 -6.95 - -7.51 0.1 1.35 1.33 0.74 0.69 1.26
0.68 -2.3 - - - -1.59 -0.89 1.0 1.22 1.32 0.85 -0.52
-0.81 -3.35 -4.46 -5.34 - - 0.5 1.05 1.38 0.85 0.53 0.94
- -1.23 - -0.95 -1.04 -0.93 -0.12 0.83 1.31 0.67 0.77 0.65
-5.58 -4.89 -5.58 -6.97 -8.41 -7.85 0.7 1.45 1.55 0.97 0.44 0.39
-2.39 -1.1 -0.47 -0.97 -1.11 -0.59 -0.21 0.3 0.85 0.75 0.46 1.02
- -2.3 - -1.5 -1.44 -0.19 -0.21 0.81 0.93 0.25 0.98 1.33
-0.03 -1.04 - - -2.86 -0.99 -0.66 0.98 0.57 0.54 0.99 1.24
-0.15 -0.58 -0.27 -0.59 -0.47 -0.09 -0.12 0.37 0.89 0.31 0.24 -0.36
-4.12 -2.66 - - -3.54 -1.26 0.39 0.83 1.12 1.02 0.79 1.19
- -2.18 - 0.07 - - 0.23 0.75 0.79 1.13 -0.35 1.66
- -5.37 - - - -4.66 -0.73 0.82 1.67 1.79 1.03 -0.14
-2.23 -1.04 -0.89 -0.46 0.1 -1.03 -0.2 0.43 0.93 0.94 0.63 -0.21
- - - - - - - 2.42 1.78 1.68 - -
-0.04 - - - - -2.32 -1.84 1.31 1.73 1.28 1.21 -
- -3.41 -1.91 -2.02 -2.55 -0.9 -0.72 0.4 1.37 0.48 0.72 1.65
-2.39 -2.23 -0.3 0.18 -0.78 -0.81 -0.77 -0.08 0.77 0.92 0.95 0.52
- - - - - - 0.1 1.14 1.89 0.79 0.75 0.68
- - - -2.77 -4.21 - 1.07 1.32 1.3 0.34 0.7 0.88
-0.03 -3.01 - -0.62 -2.15 -1.3 0.17 0.26 1.46 0.83 0.26 0.65
- -3.42 - -1.83 - -2.72 -1.82 -1.23 1.37 1.93 1.87 -0.45
- -1.97 - -1.16 -1.1 -1.26 0.95 0.64 1.33 1.49 -0.14 -0.52
-1.06 -2.45 -2.9 - -2.88 -2.33 1.04 0.69 0.97 0.5 0.43 1.31
-0.26 -1.82 -3.68 -3.01 -3.67 -1.79 0.01 0.19 1.36 0.76 0.92 1.01
-0.32 -3.88 -3.75 -3.29 - -3.18 0.07 0.65 1.34 0.94 0.8 1.03
- -0.86 - - - -2.44 1.07 0.24 1.0 0.7 1.23 1.01
- -2.46 -2.33 - -3.32 - -0.11 0.57 1.72 0.76 0.77 1.27
- - - - - - 1.13 0.55 1.46 0.49 0.52 1.46
- - - - - - 0.03 0.01 1.45 1.72 1.26 0.62
-2.21 -1.97 -2.63 -3.14 -4.06 -4.78 0.29 1.39 1.27 0.51 0.51 1.04
- - - - -2.15 - 0.46 0.18 0.99 1.54 0.96 1.28
- -2.68 -1.55 - - - 1.0 1.23 1.8 0.19 0.22 0.47
-3.11 -2.41 -2.93 -5.67 -4.03 -4.29 0.67 1.17 1.34 0.71 0.52 0.98
0.92 -0.48 -2.51 -0.22 -0.85 -1.94 -1.88 0.05 0.21 0.9 0.89 0.45
- -1.95 - - - - 0.77 0.63 0.88 0.77 1.14 1.45
-0.53 -1.05 -1.79 -2.26 -3.65 -2.81 -1.52 -0.94 1.03 1.13 1.3 1.34
0.11 -1.86 - - - - -0.68 -0.49 1.65 1.44 1.2 0.22
-3.51 -3.43 -4.14 -4.71 -4.94 -7.79 0.26 0.65 1.57 1.02 0.76 1.16
-2.45 -2.59 -2.85 -3.76 -4.07 -3.69 0.48 0.88 1.42 0.94 0.45 1.08
-0.52 -1.27 -1.56 -2.1 -2.81 -3.16 0.35 0.69 1.02 0.49 0.59 1.16
-3.75 -2.91 -4.03 -6.93 -8.66 -7.52 0.78 1.03 1.45 0.8 0.63 0.96
- 1.33 - - - - - - 2.3 2.2 - -
-2.85 -2.6 -3.71 -4.12 -4.27 -3.56 0.58 1.18 1.44 0.82 0.48 0.84
- -5.27 -4.13 -2.88 -2.47 -1.68 0.49 0.8 1.82 1.18 0.48 -0.09
- -3.53 - -2.73 -1.8 -2.83 0.74 0.32 1.8 0.72 0.37 1.0
-4.15 -4.23 -4.26 -6.54 -6.76 -6.1 0.39 1.39 1.58 0.75 0.31 0.97
-1.42 -1.23 -1.51 -1.93 -2.7 -2.46 0.36 1.31 1.09 0.78 0.47 0.32
-0.21 -0.27 -0.6 -0.66 -0.36 -0.3 -0.96 0.13 0.67 1.1 0.65 -1.0
-2.71 -2.31 -1.28 -0.5 -1.12 -1.5 0.51 1.23 1.0 0.77 0.44 -0.16
-0.83 -1.88 -3.32 -4.78 -7.16 -7.28 0.07 1.01 1.08 0.55 0.84 1.38
-3.54 -3.06 -3.65 - -6.38 -6.11 1.06 1.17 1.5 0.73 0.24 0.75
-4.86 -3.73 -4.1 -7.23 -9.06 -6.82 0.98 1.24 1.55 0.88 0.2 0.63
-2.9 -1.65 -2.74 -5.87 -7.31 -5.76 0.64 1.29 1.49 0.85 0.24 0.63
-0.58 -1.81 -3.09 -4.3 -6.18 -7.59 -0.04 0.96 1.2 0.64 0.89 1.16
-3.77 -3.14 -3.92 -6.4 -7.43 -7.07 0.72 1.14 1.57 0.75 0.32 0.98
-0.3 -0.38 -2.14 -0.63 -0.72 -0.89 -0.35 0.09 0.35 0.86 0.93 0.64
-4.2 -3.46 -3.64 -5.93 -6.04 -5.66 0.78 1.17 1.34 0.63 0.55 1.14
- -0.1 - - - - - 0.51 1.87 1.77 - 1.35
-1.96 -2.06 -2.38 -2.3 -2.13 -1.76 0.6 1.07 1.31 0.85 0.01 0.75
- 0.28 - - -0.38 - -0.31 0.85 2.11 1.63 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.