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Heatmap: Cluster_12 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
0.38 1.15 0.94 1.05 0.11 -1.48 -2.31 -2.26 -1.64 -0.9 -0.47 0.07
0.68 0.97 0.71 0.48 -0.19 -0.87 -1.58 -1.02 -0.43 -0.34 -0.28 -0.32
0.42 1.2 0.53 -0.18 -0.69 -0.7 -0.81 -1.39 -0.54 -0.15 0.16 0.18
0.46 1.07 0.89 0.73 -0.14 -0.77 -1.61 -1.26 -0.59 -0.54 -0.43 -0.59
0.63 1.32 0.75 0.73 -0.09 -1.01 -1.88 -2.48 -1.44 -0.66 -0.21 -0.22
1.33 1.61 1.03 1.07 0.15 -1.2 -2.81 -2.87 -2.98 -3.16 -2.82 -3.63
0.5 1.04 1.14 0.84 0.3 -0.51 -1.83 -1.71 -1.03 -0.94 -0.92 -1.05
-2.39 1.17 1.64 1.68 0.99 -0.38 -4.2 -6.88 -4.74 -3.26 -2.81 -3.01
1.04 1.37 0.89 0.78 0.28 -0.16 -1.25 -2.42 -1.97 -1.85 -1.6 -2.32
0.24 1.21 1.43 1.44 0.49 -0.92 -3.42 -3.79 -2.8 -2.08 -1.48 -1.87
-0.02 0.77 0.51 0.23 -0.22 -0.14 -0.32 -0.38 -0.23 -0.26 -0.03 -0.47
0.98 0.87 0.59 0.77 0.1 -0.37 -1.39 -1.85 -1.33 -0.39 -0.29 -0.99
0.26 1.32 1.29 1.09 0.2 -0.83 -2.12 -2.48 -2.09 -1.25 -0.99 -1.14
-3.29 0.92 1.7 1.5 0.96 -0.36 -2.56 -2.61 -2.39 -1.95 -2.0 -2.57
0.6 1.2 1.14 0.51 -0.59 -1.91 -1.95 -0.81 -0.23 -0.46 -0.51 -0.92
-1.05 1.3 1.63 1.71 0.8 -0.62 -4.48 -7.72 -5.31 -3.67 -3.36 -4.09
0.7 0.99 0.77 0.63 -0.18 -1.27 -2.09 -1.73 -0.9 -0.46 -0.12 0.15
-1.59 0.8 1.48 1.28 0.66 -0.43 -1.92 -1.82 -1.33 -1.01 -0.97 -1.2
-0.6 1.15 1.55 1.52 0.66 -0.56 -2.69 -3.05 -2.5 -2.01 -2.19 -2.88
0.76 1.12 0.74 0.5 -0.38 -1.22 -2.25 -1.85 -1.09 -0.47 -0.12 0.32
0.8 1.37 0.89 0.48 -0.46 -2.1 -3.11 -1.63 -1.05 -0.48 -0.16 -0.12
0.88 1.2 1.11 0.84 0.16 -0.9 -2.23 -2.15 -1.53 -1.07 -0.83 -1.24
-0.65 1.48 1.65 1.53 0.6 -0.9 -4.76 -5.98 -4.44 -3.07 -2.59 -3.06
0.75 1.65 1.51 1.26 -0.23 -2.99 -4.42 -3.62 -3.03 -1.97 -1.78 -2.72
-1.06 1.13 1.71 1.51 0.64 -0.78 -3.58 -4.53 -3.01 -2.06 -1.72 -1.9
0.96 1.12 1.11 0.81 -0.07 -1.75 -2.62 -1.49 -0.89 -0.76 -0.8 -1.02
0.33 1.16 1.13 0.51 -0.25 -1.29 -1.7 -0.65 -0.45 -0.43 -0.53 -0.9
0.4 1.16 1.09 0.91 0.32 -0.22 -1.8 -2.28 -1.24 -0.96 -0.99 -1.3
0.6 0.97 0.7 0.31 0.03 -0.26 -0.65 -1.15 -0.62 -0.58 -0.58 -0.45
0.64 1.04 0.79 0.33 -0.64 -1.1 -0.96 -0.62 -0.31 -0.29 -0.32 -0.51
0.18 0.77 0.86 0.62 0.09 -0.24 -0.65 -0.73 -0.37 -0.47 -0.87 -0.72
0.27 1.15 1.19 0.69 0.03 -1.08 -1.37 -1.09 -1.09 -0.71 -0.52 -0.84
0.74 1.72 1.6 0.83 0.05 -0.95 -2.14 -3.1 -2.82 -2.98 -4.49 -5.73
0.62 1.28 0.96 0.52 -0.49 -1.38 -2.26 -2.28 -1.24 -0.54 -0.04 0.1
-0.19 0.99 1.3 1.0 0.49 -0.35 -1.98 -2.5 -1.27 -0.93 -0.67 -1.06
0.61 1.22 0.83 0.49 -0.01 -0.22 -1.0 -1.73 -1.1 -0.77 -0.63 -0.71
0.92 1.38 1.17 1.03 0.13 -1.13 -3.23 -2.93 -2.1 -1.5 -1.27 -1.25
0.82 1.18 0.83 0.78 0.1 -0.53 -1.77 -1.89 -1.39 -1.02 -0.77 -0.55
0.23 1.11 1.39 0.86 -0.03 -1.03 -1.89 -1.42 -0.74 -0.89 -0.95 -1.09
-0.27 1.65 1.85 1.35 0.45 -1.56 -4.4 -9.02 -6.26 -4.6 -4.14 -5.43
0.18 1.11 1.21 1.28 0.39 -0.43 -1.78 -2.44 -2.04 -1.47 -1.13 -1.45
0.84 1.23 0.99 0.71 -0.15 -1.12 -2.19 -1.8 -1.32 -0.78 -0.57 -0.49
0.38 1.03 0.66 0.11 -0.57 -0.66 -0.61 -0.45 -0.24 -0.3 -0.21 -0.36
0.64 1.08 1.04 0.37 -0.37 -0.92 -0.91 -0.8 -0.5 -0.6 -0.58 -0.92
0.86 1.58 1.17 0.98 -0.05 -0.73 -1.59 -2.86 -2.95 -2.1 -1.57 -2.02
0.11 0.97 1.14 0.86 0.04 -0.78 -1.59 -1.31 -1.16 -0.73 -0.45 -0.3
0.74 0.87 1.07 0.75 0.1 -0.52 -1.01 -2.1 -1.55 -1.08 -0.45 -0.59
0.6 1.27 1.32 0.84 0.4 -0.19 -1.66 -2.47 -2.37 -1.91 -1.84 -1.42
1.13 1.08 0.79 0.78 0.13 -0.55 -2.18 -2.14 -1.34 -0.9 -0.95 -0.8
0.7 0.93 0.81 0.73 0.23 -0.46 -1.83 -1.62 -1.23 -0.61 -0.36 -0.52
-0.53 1.33 1.75 1.53 0.72 -1.07 -4.54 -7.06 -4.16 -3.15 -2.83 -3.89
0.79 0.97 0.72 0.53 0.01 -0.51 -1.38 -1.01 -0.61 -0.42 -0.52 -0.94
0.73 1.14 1.14 0.97 0.36 -0.41 -1.62 -3.16 -2.18 -1.81 -1.01 -1.0
0.16 2.47 2.1 -1.23 -2.54 -3.7 -2.48 -4.7 - - - -2.64
0.43 0.96 0.59 0.43 -0.23 -0.62 -1.09 -1.26 -0.82 -0.26 -0.07 0.16
0.38 0.97 0.98 0.86 -0.01 -0.74 -1.95 -1.92 -0.95 -0.58 -0.29 -0.24
0.35 1.41 1.18 0.14 -0.82 -0.44 -0.88 -1.19 -0.55 -0.58 -0.79 -1.03
-0.47 1.36 1.6 1.13 0.13 -1.09 -3.46 -3.28 -2.03 -1.39 -1.0 -0.69
-0.54 1.36 1.65 1.55 0.62 -0.94 -4.9 -6.95 -4.42 -2.8 -2.28 -2.45
-1.12 1.44 1.69 1.53 0.68 -0.66 -4.49 -6.35 -4.33 -2.98 -2.71 -3.39
-3.39 0.83 1.52 1.54 0.78 -0.23 -2.73 -2.77 -1.82 -1.34 -1.08 -1.57
1.24 1.39 0.85 0.83 0.02 -0.64 -2.54 -3.32 -2.21 -1.3 -0.86 -1.6
0.45 1.03 0.75 0.67 -0.17 -0.77 -1.69 -1.39 -0.66 -0.29 -0.16 -0.31
0.58 1.0 0.41 0.21 -0.35 -0.21 -0.83 -1.32 -0.84 -0.46 -0.11 0.25
-0.57 0.87 1.02 0.84 0.33 -0.49 -1.25 -1.11 -0.49 -0.4 -0.39 -0.71
-0.37 1.21 1.61 1.29 0.33 -0.97 -2.79 -2.94 -2.18 -1.44 -1.19 -1.63
0.51 1.0 0.46 0.08 -0.65 -0.69 -0.76 -0.63 -0.46 -0.18 0.11 -0.07
0.41 1.19 0.72 0.39 -0.3 -0.18 -0.66 -0.86 -1.01 -0.73 -0.52 -0.41
-1.01 1.06 1.66 1.4 0.61 -0.59 -3.33 -2.8 -1.81 -1.47 -1.52 -2.38
-0.07 1.26 1.54 1.32 0.42 -0.86 -3.36 -2.9 -1.9 -1.56 -1.74 -2.3
-0.49 1.32 1.71 1.34 0.44 -1.04 -4.33 -4.32 -2.77 -1.82 -1.54 -1.85
0.86 1.13 1.02 0.62 -0.03 -1.18 -2.91 -1.76 -0.83 -0.43 -0.52 -0.76
-1.18 1.08 1.6 1.36 0.47 -1.1 -3.59 -3.13 -2.02 -1.18 -0.86 -0.86
0.06 0.7 0.61 0.36 -0.45 -0.81 -1.31 -0.64 -0.19 0.01 0.2 0.21
-0.21 0.97 1.1 0.6 0.17 -1.58 -1.64 -0.84 -0.54 -0.28 -0.08 -0.49
0.13 1.13 1.33 1.16 0.4 -0.5 -2.36 -2.03 -1.53 -1.24 -1.11 -1.84
0.85 1.4 1.09 0.12 -0.75 -1.06 -1.33 -1.17 -0.57 -0.57 -0.81 -0.98
0.45 1.41 1.45 0.82 -0.08 -1.42 -3.07 -2.63 -1.3 -0.89 -0.88 -1.33
-0.14 0.95 1.08 0.89 0.35 -0.14 -1.24 -1.76 -1.0 -0.74 -0.64 -0.85
0.06 0.7 0.67 0.42 -0.46 -1.17 -1.84 -0.9 -0.19 0.12 0.33 0.26
0.83 1.37 0.85 0.45 -0.55 -0.96 -1.21 -1.14 -0.76 -0.62 -0.6 -1.02
0.6 1.02 0.73 0.15 -0.35 -0.73 -0.7 -0.52 -0.33 -0.32 -0.47 -0.59
1.1 1.74 1.44 1.0 0.13 -2.97 -4.6 -4.41 -4.02 -3.16 -2.09 -3.59
0.76 0.94 0.57 0.66 0.2 -0.16 -1.1 -1.36 -1.5 -0.72 -0.34 -0.58
0.22 0.97 0.45 0.04 -0.49 -0.47 -0.53 -0.31 -0.61 -0.33 0.12 0.03
0.16 0.85 0.59 0.37 -0.18 -0.66 -0.86 -0.79 -0.42 -0.27 -0.09 0.16
0.03 1.05 0.91 0.28 -1.08 -3.01 -1.95 -0.92 -0.15 0.06 0.33 0.31
0.33 0.88 0.41 0.06 -0.27 -0.21 -0.45 -0.71 -0.65 -0.31 -0.04 0.12
0.45 0.94 0.57 -0.04 -0.68 -0.57 -0.56 -0.43 -0.07 -0.15 -0.12 -0.38
0.72 1.47 0.94 0.41 -0.32 -0.79 -1.44 -1.8 -1.45 -0.82 -0.49 -0.59
0.29 1.09 0.81 0.39 -0.29 -0.78 -1.05 -0.62 -0.8 -0.46 -0.18 -0.21
0.76 1.35 0.98 0.57 -0.15 -0.29 -1.14 -2.62 -2.5 -1.9 -0.72 -0.12
0.63 1.04 0.89 0.87 -0.11 -1.24 -2.59 -1.9 -1.46 -0.48 -0.19 -0.03
0.55 1.36 1.14 0.7 -0.55 -1.03 -1.88 -1.64 -0.85 -0.67 -0.73 -0.81
0.13 0.82 0.82 0.11 -0.93 -1.33 -1.64 -0.29 0.06 0.18 0.24 -0.19
0.34 0.77 0.72 0.6 0.02 -0.16 -1.29 -0.97 -0.85 -0.53 -0.13 -0.17
0.89 1.34 1.36 0.99 0.11 -1.36 -3.35 -2.69 -1.7 -1.41 -1.47 -1.81
0.4 0.82 0.55 0.49 -0.0 -0.61 -0.96 -0.94 -0.42 -0.19 -0.09 -0.34
0.03 0.95 0.76 0.57 -0.02 -0.34 -0.9 -1.08 -0.69 -0.41 -0.2 -0.25
0.79 1.19 0.71 0.74 -0.08 -1.62 -2.89 -2.0 -1.58 -0.7 0.03 0.06
0.52 1.33 0.84 0.4 -0.17 -0.32 -0.78 -1.49 -1.36 -1.0 -0.55 -0.44
0.36 1.22 1.13 0.59 -0.52 -1.62 -2.24 -1.36 -0.77 -0.35 -0.17 -0.32
0.95 1.49 1.57 1.27 0.49 -1.15 -5.24 -10.52 -11.8 - -11.79 -11.26
0.41 1.21 0.4 -0.3 -0.74 -0.64 -0.82 -0.23 -0.46 -0.19 0.09 -0.14
0.16 1.12 1.12 0.96 0.15 -0.53 -2.1 -2.01 -1.26 -0.87 -0.57 -0.57
0.63 1.27 0.76 0.22 -0.61 -0.68 -0.7 -0.85 -0.97 -0.72 -0.27 -0.38
0.92 1.23 0.98 0.7 -0.34 -1.75 -2.86 -1.73 -1.41 -0.63 -0.33 -0.27
0.8 1.12 0.98 0.71 0.23 -0.5 -1.74 -1.98 -1.13 -0.89 -0.78 -1.05
0.25 0.88 0.72 0.46 -0.41 -1.28 -1.76 -0.56 -0.2 0.06 0.04 -0.22
0.31 1.09 0.95 0.34 -0.23 -0.44 -1.2 -1.29 -0.45 -0.34 -0.41 -0.46
0.02 1.06 0.83 0.29 -0.26 -0.3 -0.72 -0.76 -0.75 -0.34 -0.27 -0.26
0.38 1.07 1.14 0.9 0.15 -0.79 -2.03 -1.55 -0.89 -0.8 -0.8 -0.83
-1.62 1.29 1.75 1.6 0.62 -1.22 -5.01 -6.01 -3.96 -2.43 -1.86 -1.87
0.42 1.31 1.46 1.14 0.47 -0.65 -2.77 -3.45 -2.25 -1.93 -1.9 -2.14
-0.22 1.1 1.32 1.05 0.14 -0.8 -2.56 -2.43 -1.42 -0.76 -0.44 -0.49
0.84 1.52 1.29 1.0 0.15 -1.58 -2.83 -2.86 -2.05 -1.6 -1.53 -1.97
0.26 1.0 0.78 0.47 -0.32 -1.11 -1.79 -1.26 -0.79 -0.27 0.17 0.27
0.92 1.12 0.91 0.86 -0.11 -1.17 -2.54 -2.07 -1.39 -0.77 -0.43 -0.45
0.13 1.5 1.59 1.29 0.47 -1.04 -4.3 -4.71 -3.22 -2.33 -2.3 -2.78
0.85 0.87 0.75 0.63 -0.01 -0.64 -1.76 -1.15 -0.78 -0.58 -0.32 -0.48
-0.37 1.35 1.56 1.42 0.58 -0.67 -3.49 -4.95 -3.25 -2.33 -1.9 -2.14
0.81 1.29 0.89 0.5 -0.39 -0.97 -1.65 -1.63 -0.86 -0.61 -0.34 -0.71
1.04 1.37 1.02 0.52 -0.89 -4.62 -4.13 -2.24 -1.39 -0.36 -0.02 -0.15
1.42 1.76 1.36 0.6 0.13 -1.07 -2.17 -5.27 - -5.51 - -6.83
0.49 1.14 1.28 0.94 0.36 -0.39 -1.8 -2.2 -1.45 -1.36 -1.3 -1.6
0.68 1.22 1.05 0.92 0.16 -0.94 -2.24 -1.99 -1.29 -1.04 -0.69 -1.06
0.46 1.0 0.62 0.14 -0.56 -0.6 -0.69 -0.51 -0.42 -0.25 -0.15 -0.26
0.1 0.9 0.79 0.92 -0.19 -0.7 -1.05 -0.93 -0.82 -0.51 -0.28 -0.24
-0.3 1.18 1.34 1.42 0.65 -0.62 -2.83 -2.63 -1.95 -1.6 -1.29 -2.32
1.08 1.33 1.07 0.72 -0.14 -1.21 -2.77 -2.97 -1.82 -0.96 -0.64 -0.8
-0.75 1.91 1.91 0.87 -0.57 -2.36 -2.45 -1.85 -1.48 -2.68 -3.12 -3.46
-0.56 1.33 1.8 1.26 0.49 -1.02 -3.92 -4.47 -2.62 -1.81 -1.77 -2.54
0.9 1.36 1.03 0.9 -0.03 -1.16 -2.68 -2.77 -2.3 -1.45 -0.61 -0.48
0.34 0.74 0.62 0.33 -0.6 -1.48 -1.92 -0.84 -0.16 0.21 0.31 0.19
0.83 1.2 0.74 0.79 0.11 -1.11 -2.41 -1.54 -1.21 -0.8 -0.45 -0.51
1.04 1.28 0.83 0.96 0.22 -0.39 -2.63 -4.32 -2.98 -1.6 -0.79 -0.69
-0.18 0.75 1.09 0.54 0.15 -0.3 -0.81 -0.8 -0.29 -0.41 -0.57 -0.88
0.77 1.21 0.96 0.54 -0.01 -0.55 -1.36 -1.69 -0.97 -0.88 -0.78 -0.79
0.13 0.78 0.89 0.41 -0.48 -1.61 -2.18 -1.0 -0.46 0.06 0.28 0.33
0.45 1.22 1.51 1.11 0.36 -0.75 -2.34 -2.12 -2.17 -2.05 -1.67 -2.29
0.0 0.73 0.35 0.22 -0.06 -0.02 -0.25 -0.48 -0.32 -0.33 -0.15 -0.16
0.6 1.27 0.73 0.33 -0.53 -0.83 -1.28 -1.31 -0.77 -0.5 -0.17 -0.14
0.34 1.06 1.01 0.65 -0.35 -1.33 -1.17 -1.0 -0.63 -0.45 -0.3 -0.39
0.78 1.25 0.79 0.5 -0.53 -1.35 -2.18 -2.0 -1.79 -0.79 -0.05 0.46
0.38 1.23 0.82 0.39 -0.43 -1.1 -1.55 -0.99 -0.7 -0.32 -0.03 -0.26
0.68 1.25 1.19 0.94 0.41 -0.57 -2.33 -2.28 -1.68 -1.35 -1.29 -1.83
-0.84 1.4 1.81 1.5 0.67 -0.94 -4.65 -7.44 -5.02 -3.59 -3.16 -3.85
-2.8 1.13 1.67 1.81 1.03 -0.32 -4.54 -7.17 -6.52 -5.17 -4.77 -6.55
0.13 0.84 0.8 0.67 0.29 -0.24 -1.19 -1.24 -0.75 -0.32 -0.47 -0.45
1.41 2.21 1.44 -0.78 -1.55 -2.8 -3.48 -3.9 -2.53 -1.9 -1.96 -3.34
0.36 1.03 0.85 0.77 0.0 -0.78 -1.69 -1.25 -0.88 -0.52 -0.29 -0.35
0.36 0.94 0.82 0.31 -0.0 -0.32 -0.64 -0.85 -0.52 -0.45 -0.56 -0.53
0.56 0.82 0.28 0.07 -0.44 -0.36 -0.5 -0.38 -0.28 -0.19 -0.15 -0.15
0.29 0.93 0.86 0.14 -0.33 -0.35 -0.28 -0.61 -0.26 -0.4 -0.44 -0.8
0.57 1.16 0.72 0.5 -0.42 -1.3 -2.36 -1.56 -1.11 -0.45 0.07 0.35
0.43 1.02 0.59 0.3 -0.43 -0.63 -1.02 -0.79 -0.71 -0.28 0.06 -0.08
0.71 1.23 0.88 0.74 0.34 -0.34 -2.02 -2.02 -2.22 -1.15 -0.59 -0.68
-0.02 1.2 1.41 1.01 0.17 -0.77 -2.62 -2.11 -1.18 -0.83 -0.85 -1.39
1.07 1.29 0.99 0.87 0.09 -0.87 -2.28 -2.82 -1.81 -1.27 -0.89 -1.15
0.24 0.92 0.6 0.0 -0.64 -0.71 -0.67 -0.33 -0.09 -0.25 -0.04 -0.02
- 1.24 2.04 1.48 1.16 -2.26 - -3.24 -3.42 - -3.29 -
1.01 1.21 1.0 0.78 0.23 -0.48 -1.95 -1.93 -1.38 -1.27 -1.34 -1.54
0.05 1.08 1.44 1.09 0.46 -0.54 -1.31 -1.8 -1.48 -1.59 -1.64 -2.13
0.71 1.23 0.97 0.5 -0.5 -0.99 -1.58 -1.38 -0.84 -0.61 -0.44 -0.39
0.33 1.01 0.55 0.24 -0.55 -0.78 -0.74 -0.46 -0.58 -0.25 0.01 -0.02
1.19 1.37 1.03 0.84 0.34 -0.47 -2.0 -3.39 -2.35 -2.17 -1.64 -2.05
-0.05 0.81 0.39 -0.0 -0.57 -0.71 -0.55 -0.22 -0.27 -0.05 0.2 0.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.