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Heatmap: Cluster_54 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
- - 0.79 -0.33 0.78 -0.06 -0.52 -0.14 0.59 -0.45 0.68 0.44
- - 3.58 - - - - - - - - -
- - 0.71 -0.14 0.61 -0.32 -0.58 - 1.52 -0.64 1.56 -
-0.06 -0.31 -0.1 -0.3 -0.08 -0.07 0.1 -0.06 0.15 0.34 0.22 0.03
-0.14 -0.32 -0.01 -0.24 0.01 -0.06 0.09 0.14 0.1 0.18 0.25 -0.11
0.04 -0.21 -0.05 -0.17 0.02 -0.0 0.07 0.07 0.16 0.16 -0.01 -0.13
-0.19 -0.05 0.06 -0.19 0.11 -0.03 0.12 0.11 0.09 0.07 0.08 -0.25
-0.76 0.41 -0.16 0.23 -0.03 0.1 0.18 0.48 -0.29 -0.43 0.4 -0.87
-0.64 -0.68 0.21 -0.77 0.44 -1.02 0.78 0.28 -0.28 -0.14 0.18 0.44
- - 2.41 - - - - - - - 2.74 -
0.39 -0.26 0.08 -2.92 -0.64 -2.93 1.25 -0.19 0.51 -0.35 0.81 -0.59
- - 0.88 - - - 2.67 - - - 1.93 -
2.92 - - - - - 2.15 - - - - -
0.05 -0.22 -0.05 -0.07 0.11 -0.12 0.11 0.24 0.22 -0.05 0.06 -0.4
-0.87 -0.7 -0.76 -2.76 0.26 -0.41 -0.39 0.61 1.19 0.99 0.23 -1.25
-1.48 -2.26 0.2 - 0.66 -1.21 0.1 -2.23 0.89 1.11 1.14 -0.38
-0.17 -0.25 0.18 0.13 0.19 -0.22 0.09 0.12 0.12 -0.05 0.01 -0.25
- - 1.82 - - - - - 3.08 - - -
-1.08 -0.91 0.4 -0.97 -0.34 -0.23 0.38 0.25 1.1 -1.02 1.19 -3.17
-0.02 -0.15 -0.09 -0.09 -0.08 0.09 0.12 0.02 0.06 0.1 0.01 0.01
- 0.25 0.2 0.63 -0.27 -2.53 0.57 0.79 0.38 -0.37 0.67 -2.06
-1.43 -0.41 0.6 -3.02 0.34 -3.2 0.43 0.13 -0.45 0.54 1.13 0.07
0.04 -0.22 -0.18 -0.18 -0.03 0.01 -0.05 -0.04 0.1 0.25 0.07 0.14
0.28 - 2.45 - 0.67 - - - -1.23 -0.99 0.67 0.26
- - 0.69 - - - - 1.88 1.4 - 2.03 -
- - -0.04 - 0.59 - 1.46 -0.18 0.8 0.04 1.64 -
- - 2.74 - - - - - 1.88 0.69 - -
- - 2.45 - - - - - 2.71 - - -
-0.27 -0.04 -0.09 0.02 -0.0 -0.15 0.22 0.19 0.04 0.04 0.18 -0.23
2.92 - - - - - 2.15 - - - - -
- - 3.35 - - - - - 0.83 - - -
-0.4 -1.04 0.05 0.64 0.83 -1.77 -0.21 1.14 0.34 -1.49 -0.67 -0.38
-0.06 -0.11 -0.05 -0.32 -0.12 -0.09 0.29 -0.04 0.17 0.32 -0.0 -0.12
-0.18 -0.15 -0.1 -0.16 0.06 -0.32 0.03 0.12 0.12 0.29 0.14 0.02
- - 2.96 - 1.03 - - - 1.13 - - -
- 0.39 - - 0.44 - 1.59 0.96 - 0.78 1.41 -
- -2.9 1.34 -0.53 -0.19 -2.03 0.57 -0.77 0.07 1.21 0.51 -0.59
-0.67 -0.58 0.4 0.53 -0.3 -1.22 0.3 0.83 0.46 -1.62 0.76 -1.77
-1.15 -1.6 1.08 -0.38 -0.48 0.63 -0.51 0.11 0.13 0.58 0.07 -0.62
-0.13 -0.08 -0.19 -0.08 -0.07 -0.09 0.29 0.24 0.14 0.09 0.01 -0.22
-0.69 -1.75 1.62 - -0.18 0.87 -0.13 -1.27 -0.13 1.03 -0.2 -2.7
- - 0.15 - 1.49 - 1.2 0.83 1.23 - 0.74 -
-0.11 -0.37 0.01 0.09 0.09 -0.02 -0.02 0.13 0.17 0.01 0.1 -0.16
0.06 -0.38 -0.09 -0.5 -2.5 -0.57 -0.22 0.19 0.66 0.54 0.7 0.05
- - 1.83 - -1.27 - - 1.66 - -1.35 2.16 -
-0.4 -0.09 -0.03 -0.04 0.01 0.1 -0.0 0.03 -0.06 0.2 0.3 -0.13
2.19 - - - - - 2.01 - 0.1 - 0.28 0.17
-0.53 -0.3 0.6 -2.16 0.59 -1.84 0.02 -3.55 0.87 0.95 0.83 -1.55
- -1.47 0.29 -1.46 0.77 0.13 0.87 0.15 0.71 0.03 0.5 -2.03
- - 2.47 - 2.1 - - - 1.12 - - -
-0.18 -0.34 -0.11 -0.32 -0.11 0.15 0.09 0.49 0.38 0.05 0.03 -0.44
- - 2.45 - - - - - 2.71 - - -
-0.01 0.54 1.9 - 0.13 - 0.04 - 0.76 - 1.0 -
0.01 -0.34 -0.34 -0.12 -0.05 0.08 0.15 0.09 0.05 0.21 0.06 0.09
-2.1 -3.16 1.39 -0.19 0.68 -0.53 0.15 0.81 1.13 -2.32 -1.0 -3.18
- - 1.91 - - -0.39 - - -1.0 1.79 1.49 -0.5
-0.44 -0.33 0.3 -1.13 0.49 0.12 0.19 0.14 0.09 0.05 0.44 -0.74
-0.12 0.03 -0.66 -1.11 -0.04 -2.11 0.28 -0.38 0.14 0.4 1.03 0.39
- - 2.11 - 0.18 0.17 0.6 0.68 -0.1 -0.67 -1.78 -1.13
- 1.16 3.03 - - - - - - 0.66 - -
- - 2.35 - 0.2 - - - 2.02 - 0.78 -
-1.54 0.05 0.91 -1.77 -1.09 0.1 -0.06 -0.08 0.07 0.83 0.72 -0.93
- 0.67 1.63 -1.97 -2.26 - 1.17 - 1.16 -1.03 0.21 -0.5
-0.29 - 0.72 -0.59 0.67 -2.36 1.61 -0.46 -0.15 -0.67 0.82 -
0.01 - 2.47 - -0.99 - -1.15 - -0.27 0.06 0.18 0.58
-0.5 - -1.85 - -0.48 - 1.05 0.48 0.47 -0.12 1.61 0.56
0.17 0.13 -0.11 -0.3 -0.03 -0.11 0.21 -0.08 0.05 0.11 0.11 -0.28
-0.23 - 1.07 - 0.92 -2.3 -0.76 -2.15 1.39 0.53 1.05 -
-0.09 -0.16 0.6 -0.23 0.31 -0.03 -0.71 -0.82 0.33 0.31 0.28 -0.55
-0.23 -0.11 -0.16 -0.03 -0.14 -0.14 0.2 0.3 0.04 0.03 0.37 -0.29
0.45 0.04 0.12 -0.45 0.06 -1.04 -0.07 0.25 -0.13 0.12 0.36 -0.27
-0.01 -0.06 0.06 -0.06 0.16 -0.02 0.06 0.16 0.1 -0.15 0.04 -0.36
-0.52 -1.16 1.76 - -2.74 - 0.63 0.8 -0.28 -1.27 1.4 -2.82
0.35 - 1.39 - -0.84 1.01 - -0.24 0.66 - 1.63 -
0.18 -0.0 0.01 -0.09 0.04 0.06 0.02 -0.0 0.05 0.05 -0.12 -0.23
- -0.13 1.59 - - - 1.45 - 2.18 -0.29 - -
1.56 - -0.54 - - - 2.48 - - 0.29 0.65 -
0.03 -0.06 0.03 0.06 -0.03 0.04 -0.08 0.01 -0.01 0.06 -0.01 -0.05
-0.2 -0.56 0.13 0.11 -0.05 -1.58 0.3 0.72 0.2 0.41 0.31 -1.38
-1.8 -2.87 -0.35 -0.24 0.57 -0.32 0.87 1.38 0.71 -2.05 0.12 -1.9
0.06 - 1.49 -1.83 -0.48 -0.84 0.4 - 1.07 -0.91 1.12 -1.04
- - 1.61 - - - 2.35 - - - 1.94 -
- -1.63 -1.07 0.12 0.91 -1.76 -0.81 1.47 -0.15 0.13 1.22 -1.87
1.93 - -1.14 - 0.26 - 1.16 -0.47 -0.97 0.06 1.02 -
-0.21 - - - 0.35 -1.11 1.02 1.2 0.17 -0.19 1.62 -
- -1.33 1.28 0.3 0.39 - 0.65 - 0.44 -0.83 1.49 -1.57
- - 1.67 - - - - 1.6 0.84 - 2.0 -
- - -1.9 1.79 0.01 -1.45 -1.71 1.29 -0.63 -0.19 0.69 0.02
-0.37 -0.05 -0.05 -0.03 0.06 -0.05 0.09 0.08 0.04 0.03 0.22 -0.04
2.01 0.24 -0.24 - - - 1.71 - 0.74 - - -0.0
-0.23 -0.17 0.29 -0.07 0.05 -0.05 -0.15 -0.09 0.13 0.18 0.3 -0.35
-0.85 0.64 1.53 -2.74 -0.2 -0.94 -0.52 -1.59 0.8 -0.8 0.98 -2.86
1.56 0.16 0.43 -1.67 0.51 -1.21 -0.01 -0.13 -2.06 -0.44 -0.89 -0.03
-0.0 -0.1 0.06 -0.36 0.13 -0.13 -0.0 0.2 0.11 0.12 -0.02 -0.09
-0.57 -0.75 0.62 -2.13 0.55 -0.52 -0.47 0.7 -0.57 0.01 0.99 -0.33
0.38 -0.68 2.16 - -0.81 - - - 1.98 0.13 - -
0.31 0.21 0.38 0.21 0.35 -1.43 -0.43 0.12 -0.55 -0.01 0.47 -0.71
-0.04 0.03 0.17 -0.1 -0.27 -0.34 0.13 0.28 -0.09 -0.02 0.2 -0.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.